RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 IGLC6P0CF74 106 aa11.98□□□□□ -0.49
FAM53A-204ENST00000467215 AMTP48728 403 aa11.98□□□□□ -0.49
FAM53A-204ENST00000467215 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
FAM53A-204ENST00000467215 RASL11AQ6T310 242 aa11.98□□□□□ -0.49
FAM53A-204ENST00000467215 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
FAM53A-204ENST00000467215 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
FAM53A-204ENST00000467215 FAM213BQ8TBF2 198 aa11.96□□□□□ -0.49
FAM53A-204ENST00000467215 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
FAM53A-204ENST00000467215 ARPC5O15511 151 aa11.95□□□□□ -0.5
FAM53A-204ENST00000467215 COTL1Q14019 142 aa11.95□□□□□ -0.5
FAM53A-204ENST00000467215 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
FAM53A-204ENST00000467215 SPINK6Q6UWN8 80 aa11.95□□□□□ -0.5
FAM53A-204ENST00000467215 SFT2D1Q8WV19 159 aa11.95□□□□□ -0.5
FAM53A-204ENST00000467215 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
FAM53A-204ENST00000467215 CHCHD10Q8WYQ3 142 aaPredicted RBP11.94□□□□□ -0.5
FAM53A-204ENST00000467215 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
FAM53A-204ENST00000467215 NIT2Q9NQR4 276 aa11.93□□□□□ -0.5
FAM53A-204ENST00000467215 LPAP08519 4548 aa11.93□□□□□ -0.5
FAM53A-204ENST00000467215 CACNG7P62955 275 aa11.92□□□□□ -0.5
FAM53A-204ENST00000467215 TMUB2Q71RG4 321 aa11.92□□□□□ -0.5
FAM53A-204ENST00000467215 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
FAM53A-204ENST00000467215 TRGC1P0CF51 173 aa11.91□□□□□ -0.5
FAM53A-204ENST00000467215 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
FAM53A-204ENST00000467215 KCNRGQ8N5I3 272 aa11.91□□□□□ -0.5
FAM53A-204ENST00000467215 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
FAM53A-204ENST00000467215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
FAM53A-204ENST00000467215 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
FAM53A-204ENST00000467215 C19orf71A6NCJ1 209 aa11.89□□□□□ -0.51
FAM53A-204ENST00000467215 RPS20P60866 119 aaKnown RBP11.89□□□□□ -0.51
FAM53A-204ENST00000467215 FOXI1Q12951 378 aa11.89□□□□□ -0.51
FAM53A-204ENST00000467215 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM53A-204ENST00000467215 Q6ZNX1 250 aa11.89□□□□□ -0.51
FAM53A-204ENST00000467215 C11orf52Q96A22 123 aa11.89□□□□□ -0.51
FAM53A-204ENST00000467215 AMMECR1LQ6DCA0 310 aa11.88□□□□□ -0.51
FAM53A-204ENST00000467215 RNASEKQ6P5S7 137 aaKnown RBP11.88□□□□□ -0.51
FAM53A-204ENST00000467215 LYZL1Q6UWQ5 148 aa11.88□□□□□ -0.51
FAM53A-204ENST00000467215 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
FAM53A-204ENST00000467215 NTF3P20783 257 aa11.87□□□□□ -0.51
FAM53A-204ENST00000467215 Q6ZRP5 223 aa11.87□□□□□ -0.51
FAM53A-204ENST00000467215 CARD19Q96LW7 228 aa11.87□□□□□ -0.51
FAM53A-204ENST00000467215 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
FAM53A-204ENST00000467215 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
FAM53A-204ENST00000467215 UMAD1C9J7I0 102 aa11.85□□□□□ -0.51
FAM53A-204ENST00000467215 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
FAM53A-204ENST00000467215 XCL1P47992 114 aa11.85□□□□□ -0.51
FAM53A-204ENST00000467215 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
FAM53A-204ENST00000467215 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
FAM53A-204ENST00000467215 F2Z2F3 143 aa11.84□□□□□ -0.51
FAM53A-204ENST00000467215 FGF6P10767 208 aa11.84□□□□□ -0.51
FAM53A-204ENST00000467215 CTRLP40313 264 aa11.84□□□□□ -0.51
FAM53A-204ENST00000467215 GNG13Q9P2W3 67 aa11.84□□□□□ -0.51
FAM53A-204ENST00000467215 PKIGQ9Y2B9 76 aa11.84□□□□□ -0.51
FAM53A-204ENST00000467215 XKRY2A2RUG3 117 aa11.83□□□□□ -0.52
FAM53A-204ENST00000467215 IFNA1P01562 189 aa11.83□□□□□ -0.52
FAM53A-204ENST00000467215 APCSP02743 223 aa11.83□□□□□ -0.52
FAM53A-204ENST00000467215 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
FAM53A-204ENST00000467215 TRBV20OR9-2A0A075B6H5 130 aa11.82□□□□□ -0.52
FAM53A-204ENST00000467215 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
FAM53A-204ENST00000467215 CCL25O15444 150 aa11.82□□□□□ -0.52
FAM53A-204ENST00000467215 OR5A1Q8NGJ0 315 aa11.82□□□□□ -0.52
FAM53A-204ENST00000467215 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
FAM53A-204ENST00000467215 NCR2O95944 276 aa11.81□□□□□ -0.52
FAM53A-204ENST00000467215 GNG4P50150 75 aa11.81□□□□□ -0.52
FAM53A-204ENST00000467215 CCL20P78556 96 aa11.81□□□□□ -0.52
FAM53A-204ENST00000467215 ZNF345Q14585 488 aa11.81□□□□□ -0.52
FAM53A-204ENST00000467215 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
FAM53A-204ENST00000467215 SMIM12Q96EX1 92 aa11.8□□□□□ -0.52
FAM53A-204ENST00000467215 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
FAM53A-204ENST00000467215 H7C423 109 aa11.79□□□□□ -0.52
FAM53A-204ENST00000467215 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
FAM53A-204ENST00000467215 TWIST1Q15672 202 aa11.79□□□□□ -0.52
FAM53A-204ENST00000467215 CNFNQ9BYD5 112 aa11.79□□□□□ -0.52
FAM53A-204ENST00000467215 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
FAM53A-204ENST00000467215 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
FAM53A-204ENST00000467215 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
FAM53A-204ENST00000467215 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
FAM53A-204ENST00000467215 BCL2L11O43521 198 aa11.77□□□□□ -0.53
FAM53A-204ENST00000467215 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
FAM53A-204ENST00000467215 A0A1W2PNN7 141 aa11.76□□□□□ -0.53
FAM53A-204ENST00000467215 ZNF561-AS1K7EIQ3 104 aa11.76□□□□□ -0.53
FAM53A-204ENST00000467215 CAMPP49913 170 aa11.76□□□□□ -0.53
FAM53A-204ENST00000467215 BTF3L4Q96K17 158 aa11.76□□□□□ -0.53
FAM53A-204ENST00000467215 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
FAM53A-204ENST00000467215 BCL2P10415 239 aa11.75□□□□□ -0.53
FAM53A-204ENST00000467215 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
FAM53A-204ENST00000467215 NUDT10Q8NFP7 164 aa11.75□□□□□ -0.53
FAM53A-204ENST00000467215 NUDT11Q96G61 164 aa11.75□□□□□ -0.53
FAM53A-204ENST00000467215 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
FAM53A-204ENST00000467215 KANTRA0A1W2PQU2 76 aa11.74□□□□□ -0.53
FAM53A-204ENST00000467215 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
FAM53A-204ENST00000467215 IGLV4-69A0A075B6H9 119 aa11.73□□□□□ -0.53
FAM53A-204ENST00000467215 MT-ND6P03923 174 aa11.73□□□□□ -0.53
FAM53A-204ENST00000467215 MEF2BQ02080 365 aaPredicted RBP11.73□□□□□ -0.53
FAM53A-204ENST00000467215 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
FAM53A-204ENST00000467215 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
FAM53A-204ENST00000467215 TMEM242Q9NWH2 141 aa11.73□□□□□ -0.53
FAM53A-204ENST00000467215 ESDP10768 282 aa11.72□□□□□ -0.53
FAM53A-204ENST00000467215 SS18Q15532 418 aa11.72□□□□□ -0.53
FAM53A-204ENST00000467215 CD164L2Q6UWJ8 174 aa11.72□□□□□ -0.53
FAM53A-204ENST00000467215 PRR26Q8N8Z3 221 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms