RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
VPS13D-203ENST00000466732 ESPL1Q14674 2120 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 MRPL51Q4U2R6 128 aaKnown RBP2.16□□□□□ -2.06
VPS13D-203ENST00000466732 C6orf99Q4VX62 202 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 ATP5EP2Q5VTU8 51 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 C11orf71Q6IPW1 123 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 MYO7BQ6PIF6 2116 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 PRNTQ86SH4 94 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 DYNLRB2Q8TF09 96 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 WFDC6Q9BQY6 131 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 NPCDR1Q9BY65 106 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 TIMM8BQ9Y5J9 83 aaPredicted RBP2.16□□□□□ -2.06
VPS13D-203ENST00000466732 LHFPL6Q9Y693 200 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 TET2Q6N021 2002 aaPredicted RBP2.16□□□□□ -2.06
VPS13D-203ENST00000466732 CEP192Q8TEP8 1941 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV1OR21-1A0A087WYE8 117 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 IGLV3-32A0A0A0MS00 114 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 TMEM223A0PJW6 202 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 LINC01546A6NGU7 62 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 HIGD1CA8MV81 97 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 F8WEM9 126 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 CCL22O00626 93 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 PSPHP1O15172 72 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 IGLV3-27P01718 113 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 COX6CP09669 75 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 CISD3P0C7P0 127 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 ARL14EPLP0DKL9 152 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 PLNP26678 52 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF138P52744 262 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 FBXL19-AS1Q494R0 122 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 CLLU1OSQ5K130 101 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 LINC01590Q5TEZ4 76 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 SFTA2Q6UW10 78 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 DYNAPQ8N1N2 210 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 TIMM21Q9BVV7 248 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 TMEM167BQ9NRX6 74 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 UBE2D4Q9Y2X8 147 aa2.15□□□□□ -2.07
VPS13D-203ENST00000466732 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV6-1A0A0B4J1U7 121 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 A0A0J9YXV3 536 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 CXorf51AA0A1B0GTR3 108 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 E7EUB6 86 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 BGLAPP02818 100 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 PRM2P04554 102 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 CD28P10747 220 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 FGF12P61328 243 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.14□□□□□ -2.07
VPS13D-203ENST00000466732 SOSTDC1Q6X4U4 206 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF826PQ6ZT77 177 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 LINC00269Q8N2A0 174 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 FAM216BQ8N7L0 139 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 NPBQ8NG41 125 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 PFN4Q8NHR9 129 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 TMEM263Q8WUH6 116 aaKnown RBP2.14□□□□□ -2.07
VPS13D-203ENST00000466732 ITLN2Q8WWU7 325 aaPredicted RBP2.14□□□□□ -2.07
VPS13D-203ENST00000466732 ARHGAP5-AS1Q96IT6 56 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 BPESC1Q9GZL8 116 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 RPP21Q9H633 154 aaKnown RBP2.14□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF355PQ9NSJ1 428 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 U3KQK5 164 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 HEATR5BQ9P2D3 2071 aa2.14□□□□□ -2.07
VPS13D-203ENST00000466732 DSCAMO60469 2012 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 TRAV12-1A0A0B4J245 112 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 COX7A2P2O60397 106 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV3-30P01768 117 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV3-30-5P0DP03 117 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 MIFP14174 115 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 SPINT3P49223 89 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 SYCNQ0VAF6 134 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 MOBPQ13875 183 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 FAM229BQ4G0N7 80 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 TMEM61Q8N0U2 210 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 CLEC2BQ92478 149 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 PHLDA3Q9Y5J5 127 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF706Q9Y5V0 76 aaPredicted RBP2.13□□□□□ -2.07
VPS13D-203ENST00000466732 MED12Q93074 2177 aa2.13□□□□□ -2.07
VPS13D-203ENST00000466732 IGKV1-27A0A075B6S5 117 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 TRAV40A0A0B4J280 105 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV1-69DA0A0B4J2H0 117 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 IGKV1-8A0A0C4DH67 115 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 A0A0J9YY99 117 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF815PA8K554 130 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 SH2D1AO60880 128 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 IGKV1-16P04430 117 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 SAA1P0DJI8 122 aaPredicted RBP2.12□□□□□ -2.07
VPS13D-203ENST00000466732 IAPPP10997 89 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 FXYD4P59646 89 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 TFF3Q07654 80 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 DEFB116Q30KQ4 102 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 SPANXN5Q5MJ07 72 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 PATE2Q6UY27 113 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 SCXQ7RTU7 201 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms