RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 IGHV4-30-4P0DP06 118 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 LINC00315P59091 139 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 PAPPA-AS1Q5QFB9 102 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 LINC01587Q99440 93 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 MYMXA0A1B0GTQ4 84 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 E9PLD3 99 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 CSNK1G2-AS1Q8NCQ2 148 aa13.47□□□□□ -0.25
CAPN3-209ENST00000466222 AZU1P20160 251 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 VCYO14598 125 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 POLR2KP53803 58 aaKnown RBP13.45□□□□□ -0.26
CAPN3-209ENST00000466222 SYT8Q8NBV8 401 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 TMEM141Q96I45 108 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 NAA38Q9BRA0 125 aaKnown RBP13.45□□□□□ -0.26
CAPN3-209ENST00000466222 VPS25Q9BRG1 176 aa13.45□□□□□ -0.26
CAPN3-209ENST00000466222 NHP2Q9NX24 153 aaKnown RBP13.45□□□□□ -0.26
CAPN3-209ENST00000466222 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
CAPN3-209ENST00000466222 PRSS29PA6NIE9 313 aa13.44□□□□□ -0.26
CAPN3-209ENST00000466222 C9orf85Q96MD7 179 aa13.44□□□□□ -0.26
CAPN3-209ENST00000466222 HIST1H4GQ99525 98 aa13.44□□□□□ -0.26
CAPN3-209ENST00000466222 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
CAPN3-209ENST00000466222 SUMO4Q6EEV6 95 aa13.43□□□□□ -0.26
CAPN3-209ENST00000466222 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-209ENST00000466222 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
CAPN3-209ENST00000466222 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
CAPN3-209ENST00000466222 TIMM17AQ99595 171 aa13.43□□□□□ -0.26
CAPN3-209ENST00000466222 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
CAPN3-209ENST00000466222 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
CAPN3-209ENST00000466222 IGLL5B9A064 214 aa13.41□□□□□ -0.26
CAPN3-209ENST00000466222 HERVK_113P61574 105 aa13.41□□□□□ -0.26
CAPN3-209ENST00000466222 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
CAPN3-209ENST00000466222 TRBV27A0A0K0K1C4 114 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 K7ERJ3 54 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 PMVKQ15126 192 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 PRADC1Q9BSG0 188 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 TP53TG1Q9Y2A0 90 aa13.4□□□□□ -0.26
CAPN3-209ENST00000466222 C1QTNF4Q9BXJ3 329 aa13.39□□□□□ -0.27
CAPN3-209ENST00000466222 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
CAPN3-209ENST00000466222 ZNF479Q96JC4 524 aa13.39□□□□□ -0.27
CAPN3-209ENST00000466222 SDHAF1A6NFY7 115 aa13.38□□□□□ -0.27
CAPN3-209ENST00000466222 F5H697 171 aa13.38□□□□□ -0.27
CAPN3-209ENST00000466222 RHOHQ15669 191 aa13.38□□□□□ -0.27
CAPN3-209ENST00000466222 C11orf72Q8NBR9 251 aa13.38□□□□□ -0.27
CAPN3-209ENST00000466222 JPT2Q9H910 190 aa13.38□□□□□ -0.27
CAPN3-209ENST00000466222 TMEM238LA0A1B0GVL6 79 aa13.37□□□□□ -0.27
CAPN3-209ENST00000466222 A6NJY4 79 aa13.37□□□□□ -0.27
CAPN3-209ENST00000466222 CRYGDP07320 174 aa13.37□□□□□ -0.27
CAPN3-209ENST00000466222 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
CAPN3-209ENST00000466222 LINC00467Q9BRT7 94 aa13.37□□□□□ -0.27
CAPN3-209ENST00000466222 A0A087WWL8 130 aa13.36□□□□□ -0.27
CAPN3-209ENST00000466222 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
CAPN3-209ENST00000466222 TSHBP01222 138 aa13.36□□□□□ -0.27
CAPN3-209ENST00000466222 IGLV4-69A0A075B6H9 119 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 APOC4P55056 127 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 C11orf86A6NJI1 115 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 F8W1H4 67 aa13.35□□□□□ -0.27
CAPN3-209ENST00000466222 MUC4Q99102 2169 aa13.34□□□□□ -0.27
CAPN3-209ENST00000466222 M0QY20 66 aa13.34□□□□□ -0.27
CAPN3-209ENST00000466222 C21orf62-AS1Q17RA5 79 aa13.34□□□□□ -0.27
CAPN3-209ENST00000466222 ZNF56Q15929 161 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 ZNF876PQ49A33 203 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 X6R8D5 127 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 PLAC8L1A1L4L8 177 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 K7EIL1 84 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 COTL1Q14019 142 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 KPRPQ5T749 579 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-209ENST00000466222 SCGB1D4Q6XE38 83 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 EDA2RQ9HAV5 297 aa13.33□□□□□ -0.28
CAPN3-209ENST00000466222 EMP1P54849 157 aa13.32□□□□□ -0.28
CAPN3-209ENST00000466222 ZNF415Q09FC8 603 aa13.32□□□□□ -0.28
CAPN3-209ENST00000466222 MRPL16Q9NX20 251 aaKnown RBP13.32□□□□□ -0.28
CAPN3-209ENST00000466222 FAM74A4Q5TZK3 123 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 TMEM263Q8WUH6 116 aaKnown RBP13.31□□□□□ -0.28
CAPN3-209ENST00000466222 RETNQ9HD89 108 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 A8MZ25 164 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 DEFB4AO15263 64 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 KRTAP21-3Q3LHN1 58 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 NFE4Q86UQ8 179 aa13.31□□□□□ -0.28
CAPN3-209ENST00000466222 NOP10Q9NPE3 64 aaKnown RBP13.31□□□□□ -0.28
CAPN3-209ENST00000466222 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-209ENST00000466222 RPL39P62891 51 aaKnown RBP13.3□□□□□ -0.28
CAPN3-209ENST00000466222 IL17DQ8TAD2 202 aa13.29□□□□□ -0.28
CAPN3-209ENST00000466222 I3L3M4 83 aa13.29□□□□□ -0.28
CAPN3-209ENST00000466222 UBE2D1P51668 147 aa13.29□□□□□ -0.28
CAPN3-209ENST00000466222 SRSF9Q13242 221 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN3-209ENST00000466222 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
CAPN3-209ENST00000466222 M0R2P5 195 aa13.28□□□□□ -0.28
CAPN3-209ENST00000466222 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
CAPN3-209ENST00000466222 Q6ZTI0 123 aa13.28□□□□□ -0.28
CAPN3-209ENST00000466222 PLEKHB2Q96CS7 222 aa13.28□□□□□ -0.28
CAPN3-209ENST00000466222 RNF183Q96D59 192 aa13.27□□□□□ -0.28
CAPN3-209ENST00000466222 C16orf74Q96GX8 76 aa13.27□□□□□ -0.28
CAPN3-209ENST00000466222 TRGV1A0A0A0MS02 117 aa13.27□□□□□ -0.29
CAPN3-209ENST00000466222 IGHV3-73A0A0B4J1V6 119 aa13.27□□□□□ -0.29
CAPN3-209ENST00000466222 A0A0J9YY99 117 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms