RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 CDPF1Q6NVV7 123 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 UQCC3Q6UW78 93 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 RMI2Q96E14 147 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 CHCHD7Q9BUK0 85 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 A0A1B0GUT8 65 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 AMTP48728 403 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 COTL1Q14019 142 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 IQCJQ1A5X6 159 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 C10orf91Q5T1B1 145 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 C1orf43Q9BWL3 253 aa6.73□□□□□ -1.33
CD40-204ENST00000466205 IGLV4-60A0A075B6I1 120 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 IGLV10-54A0A075B6I4 117 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 UBE2L6O14933 153 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 NCR2O95944 276 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 Q0VG73 95 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 RNF185Q96GF1 192 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 GFRA4Q9GZZ7 299 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
CD40-204ENST00000466205 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.71□□□□□ -1.34
CD40-204ENST00000466205 IGKV3OR2-268A0A0C4DH90 116 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 IGKV2-29A2NJV5 120 aaPredicted RBP6.71□□□□□ -1.34
CD40-204ENST00000466205 RIGQ13278 110 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
CD40-204ENST00000466205 NAT8BQ9UHF3 227 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
CD40-204ENST00000466205 SDHAF1A6NFY7 115 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 A6NJY4 79 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 RAB4AP20338 218 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 PMCHP20382 165 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 RPS10P46783 165 aaKnown RBP6.7□□□□□ -1.34
CD40-204ENST00000466205 CAMPP49913 170 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 XGP55808 180 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 PKIAP61925 76 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 REG3AQ06141 175 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 TMEM191AQ9H0A3 160 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
CD40-204ENST00000466205 CARHSP1Q9Y2V2 147 aaKnown RBP6.7□□□□□ -1.34
CD40-204ENST00000466205 FAT1Q14517 4588 aa6.69□□□□□ -1.34
CD40-204ENST00000466205 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
CD40-204ENST00000466205 APCSP02743 223 aa6.69□□□□□ -1.34
CD40-204ENST00000466205 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
CD40-204ENST00000466205 MRPL54Q6P161 138 aaKnown RBP6.69□□□□□ -1.34
CD40-204ENST00000466205 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
CD40-204ENST00000466205 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 I3L3M4 83 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 MIAQ16674 131 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 AMMECR1LQ6DCA0 310 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
CD40-204ENST00000466205 Q8N1X5 172 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 FRZBQ92765 325 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 ST20Q9HBF5 79 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
CD40-204ENST00000466205 USP17L23D6RBM5 183 aa6.67□□□□□ -1.34
CD40-204ENST00000466205 TSHBP01222 138 aa6.67□□□□□ -1.34
CD40-204ENST00000466205 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
CD40-204ENST00000466205 TMEM70Q9BUB7 260 aa6.67□□□□□ -1.34
CD40-204ENST00000466205 TRBV6-5A0A0K0K1A5 114 aa6.66□□□□□ -1.34
CD40-204ENST00000466205 F8W036 122 aa6.66□□□□□ -1.34
CD40-204ENST00000466205 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
CD40-204ENST00000466205 MRAP2Q96G30 205 aa6.66□□□□□ -1.34
CD40-204ENST00000466205 A0A1B0GUV1 79 aa6.65□□□□□ -1.34
CD40-204ENST00000466205 FGF6P10767 208 aa6.65□□□□□ -1.34
CD40-204ENST00000466205 FAM104BQ5XKR9 115 aa6.65□□□□□ -1.34
CD40-204ENST00000466205 NRACQ8N912 160 aa6.65□□□□□ -1.34
CD40-204ENST00000466205 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 PRSS1P07477 247 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 S100A1P23297 94 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 FCER1GP30273 86 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 POLR2KP53803 58 aaKnown RBP6.64□□□□□ -1.35
CD40-204ENST00000466205 HBBP68871 147 aa6.64□□□□□ -1.35
CD40-204ENST00000466205 A0A1B0GXF2 115 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 D6R8Y8 96 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 CKS2P33552 79 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 SUMO2P61956 95 aaKnown RBP6.63□□□□□ -1.35
CD40-204ENST00000466205 C14orf177Q52M58 125 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 Q5VSD8 79 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 TMEM101Q96IK0 257 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 BTF3L4Q96K17 158 aa6.63□□□□□ -1.35
CD40-204ENST00000466205 TRAV8-4A0A0B4J246 113 aa6.62□□□□□ -1.35
CD40-204ENST00000466205 A0A1B0GW15 77 aa6.62□□□□□ -1.35
CD40-204ENST00000466205 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
CD40-204ENST00000466205 C7orf77A4D0Y5 90 aa6.62□□□□□ -1.35
CD40-204ENST00000466205 VCYO14598 125 aa6.62□□□□□ -1.35
CD40-204ENST00000466205 PPP1R2P9O14990 202 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms