RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 A0A1B0GXF2 115 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 ODF1Q14990 250 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 LINC01006Q8NI28 216 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 CHCHD5Q9BSY4 110 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 ORMDL1Q9P0S3 153 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 WNK1Q9H4A3 2382 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 PSMB8P28062 276 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 DAD1P61803 113 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 VSIG2Q96IQ7 327 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 MLST8Q9BVC4 326 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 FRYQ5TBA9 3013 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 IGHV4OR15-8A0A075B7B6 117 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 A0A087WW49 117 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 F8W735 103 aaPredicted RBP5.83□□□□□ -1.48
USP54-210ENST00000466048 MRPS12O15235 138 aaKnown RBP5.83□□□□□ -1.48
USP54-210ENST00000466048 SLURP1P55000 103 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 CLUHP3Q96NS8 147 aa5.83□□□□□ -1.48
USP54-210ENST00000466048 POLQO75417 2590 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
USP54-210ENST00000466048 CCDC140Q96MF4 163 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 ZFAND3Q9H8U3 227 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 HECTD1Q9ULT8 2610 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 BUB3O43684 328 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 ZNF702PQ9H963 129 aa5.82□□□□□ -1.48
USP54-210ENST00000466048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.81□□□□□ -1.48
USP54-210ENST00000466048 XCL2Q9UBD3 114 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 C19orf71A6NCJ1 209 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 F8WEM9 126 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 SS18Q15532 418 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 TIMM17AQ99595 171 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 ARHGAP32A7KAX9 2087 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 C11orf86A6NJI1 115 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
USP54-210ENST00000466048 Q8N1Y9 231 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 FAM110AQ9BQ89 295 aa5.81□□□□□ -1.48
USP54-210ENST00000466048 PDE6GP18545 87 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 KLK5Q9Y337 293 aaPredicted RBP5.8□□□□□ -1.48
USP54-210ENST00000466048 IGHV1OR15-1A0A075B7D0 117 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 TRGV1A0A0A0MS02 117 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 A0A087WWL8 130 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 IGLV1-40P01703 118 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 MUSTN1Q8IVN3 82 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 U3KQE9 123 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 COX8CQ7Z4L0 72 aa5.8□□□□□ -1.48
USP54-210ENST00000466048 A0A096LNT2 108 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 LINC01548A6NM66 108 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 P0DMU3 169 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 FAM231AP0DMU4 169 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 FAM231CP0DMU5 169 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 MED14OSP0DP75 135 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 C20orf173Q96LM9 149 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 PLXNB1O43157 2135 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 FAM236DA0A1B0GTK5 79 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 FAM236CP0DP71 79 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 TOMM6Q96B49 74 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 RMI2Q96E14 147 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 NDUFC1O43677 76 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 IGLV2-11P01706 119 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 SPART-AS1P0CW21 52 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
USP54-210ENST00000466048 TCL1BO95988 128 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 CXCL5P42830 114 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 FSHBP01225 129 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 UFSP1Q6NVU6 142 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 TP53TG3Q9ULZ0 132 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 DSPP15924 2871 aaKnown RBP5.78□□□□□ -1.48
USP54-210ENST00000466048 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 IGFL4Q6B9Z1 124 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 C16orf74Q96GX8 76 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 TRAV26-2A0A0B4J265 109 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 NDUFC2-KCTD14E9PQ53 114 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 PRB4P10163 310 aaPredicted RBP5.78□□□□□ -1.48
USP54-210ENST00000466048 DMXL2Q8TDJ6 3036 aa5.78□□□□□ -1.48
USP54-210ENST00000466048 AVPP01185 164 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 CFHR3Q02985 330 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 TINCRA0A1B0GVN0 87 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 F5H768 121 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 IGHV3-53P01767 116 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 CELSR3Q9NYQ7 3312 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 SPINK13Q1W4C9 94 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 ZFP2Q6ZN57 461 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
USP54-210ENST00000466048 ZFHX4Q86UP3 3567 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 MTORP42345 2549 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 IGLC6P0CF74 106 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 COX7CP15954 63 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 ODF3Q96PU9 254 aa5.76□□□□□ -1.49
USP54-210ENST00000466048 TP73-AS1Q9UF72 201 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms