RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 G3V3Q6 166 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 UBE2L6O14933 153 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 GIPP09681 153 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-206ENST00000465673 IGLC6P0CF74 106 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 AMTP48728 403 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 TMUB2Q71RG4 321 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 SFT2D1Q8WV19 159 aa6.38□□□□□ -1.39
GPNMB-206ENST00000465673 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-206ENST00000465673 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-206ENST00000465673 H7C1H1 209 aa6.37□□□□□ -1.39
GPNMB-206ENST00000465673 S100A9P06702 114 aaKnown RBP6.37□□□□□ -1.39
GPNMB-206ENST00000465673 FER1L6-AS1Q8NA97 138 aa6.37□□□□□ -1.39
GPNMB-206ENST00000465673 PGLYRP4Q96LB8 373 aa6.37□□□□□ -1.39
GPNMB-206ENST00000465673 NIT2Q9NQR4 276 aa6.37□□□□□ -1.39
GPNMB-206ENST00000465673 ARPC5O15511 151 aa6.36□□□□□ -1.39
GPNMB-206ENST00000465673 RPL35P42766 123 aaKnown RBP6.36□□□□□ -1.39
GPNMB-206ENST00000465673 COTL1Q14019 142 aa6.36□□□□□ -1.39
GPNMB-206ENST00000465673 OR2D3Q8NGH3 330 aa6.36□□□□□ -1.39
GPNMB-206ENST00000465673 FAM213BQ8TBF2 198 aa6.36□□□□□ -1.39
GPNMB-206ENST00000465673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-206ENST00000465673 TRAV26-2A0A0B4J265 109 aa6.35□□□□□ -1.39
GPNMB-206ENST00000465673 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-206ENST00000465673 PFDN1O60925 122 aa6.35□□□□□ -1.39
GPNMB-206ENST00000465673 FOXI1Q12951 378 aa6.35□□□□□ -1.39
GPNMB-206ENST00000465673 Q6ZNX1 250 aa6.35□□□□□ -1.39
GPNMB-206ENST00000465673 MBD3L1Q8WWY6 194 aa6.35□□□□□ -1.39
GPNMB-206ENST00000465673 RAB19A4D1S5 217 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 SMLR1H3BR10 107 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 NTF3P20783 257 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 XCL1P47992 114 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 CACNG7P62955 275 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 CENPWQ5EE01 88 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
GPNMB-206ENST00000465673 LYZL1Q6UWQ5 148 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 Q6ZRP5 223 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 KCNRGQ8N5I3 272 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 GATD1Q8NB37 220 aa6.34□□□□□ -1.39
GPNMB-206ENST00000465673 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
GPNMB-206ENST00000465673 C19orf71A6NCJ1 209 aa6.33□□□□□ -1.4
GPNMB-206ENST00000465673 CCL20P78556 96 aa6.33□□□□□ -1.4
GPNMB-206ENST00000465673 AMMECR1LQ6DCA0 310 aa6.33□□□□□ -1.4
GPNMB-206ENST00000465673 RPL39LQ96EH5 51 aaKnown RBP6.33□□□□□ -1.4
GPNMB-206ENST00000465673 FGF6P10767 208 aa6.32□□□□□ -1.4
GPNMB-206ENST00000465673 FOXA3P55318 350 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-206ENST00000465673 CARD19Q96LW7 228 aa6.32□□□□□ -1.4
GPNMB-206ENST00000465673 F2Z2F3 143 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 CCL25O15444 150 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 IFNA1P01562 189 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 TRGC1P0CF51 173 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
GPNMB-206ENST00000465673 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 TWIST1Q15672 202 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 GNG13Q9P2W3 67 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
GPNMB-206ENST00000465673 LINC00959A0A1B0GUT2 108 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 FAM231BA6NCW3 169 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 C11orf52Q96A22 123 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 MUC2Q02817 5179 aa6.3□□□□□ -1.4
GPNMB-206ENST00000465673 TRBV20OR9-2A0A075B6H5 130 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 UMAD1C9J7I0 102 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 BCL2P10415 239 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 C9orf62Q8N4C0 152 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 OR5A1Q8NGJ0 315 aa6.29□□□□□ -1.4
GPNMB-206ENST00000465673 IGLV4-69A0A075B6H9 119 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 SDHAF1A6NFY7 115 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 APCSP02743 223 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 CTRLP40313 264 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 GNG4P50150 75 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 PHF5AQ7RTV0 110 aaKnown RBP6.28□□□□□ -1.4
GPNMB-206ENST00000465673 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
GPNMB-206ENST00000465673 XKRY2A2RUG3 117 aa6.27□□□□□ -1.41
GPNMB-206ENST00000465673 NCR2O95944 276 aa6.27□□□□□ -1.41
GPNMB-206ENST00000465673 MT-ND6P03923 174 aa6.27□□□□□ -1.41
GPNMB-206ENST00000465673 CAMPP49913 170 aa6.27□□□□□ -1.41
GPNMB-206ENST00000465673 C9orf116Q5BN46 136 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-206ENST00000465673 C1orf137Q5JT78 98 aa6.27□□□□□ -1.41
GPNMB-206ENST00000465673 LOC107984640A0A0U1RRK4 108 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 H7C423 109 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 PMCHP20382 165 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 BTF3L4Q96K17 158 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 RNASE7Q9H1E1 156 aaKnown RBP6.26□□□□□ -1.41
GPNMB-206ENST00000465673 MANBALQ9NQG1 85 aa6.26□□□□□ -1.41
GPNMB-206ENST00000465673 I3L3M4 83 aa6.25□□□□□ -1.41
GPNMB-206ENST00000465673 TSHBP01222 138 aa6.25□□□□□ -1.41
GPNMB-206ENST00000465673 ESDP10768 282 aa6.25□□□□□ -1.41
GPNMB-206ENST00000465673 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-206ENST00000465673 SS18Q15532 418 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms