RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 ADIRFQ15847 76 aa10.25□□□□□ -0.77
SCAP-209ENST00000465628 TEX261Q6UWH6 196 aa10.25□□□□□ -0.77
SCAP-209ENST00000465628 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
SCAP-209ENST00000465628 RPL39LQ96EH5 51 aaKnown RBP10.25□□□□□ -0.77
SCAP-209ENST00000465628 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
SCAP-209ENST00000465628 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
SCAP-209ENST00000465628 REG3AQ06141 175 aa10.24□□□□□ -0.77
SCAP-209ENST00000465628 LINC01620Q4KN68 170 aa10.24□□□□□ -0.77
SCAP-209ENST00000465628 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
SCAP-209ENST00000465628 USP17L23D6RBM5 183 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 APCSP02743 223 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 PEA15Q15121 130 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 TMEM241Q24JQ0 296 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 AMMECR1LQ6DCA0 310 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
SCAP-209ENST00000465628 ISOC2Q96AB3 205 aa10.22□□□□□ -0.77
SCAP-209ENST00000465628 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
SCAP-209ENST00000465628 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
SCAP-209ENST00000465628 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 SDHAF1A6NFY7 115 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 RIGQ13278 110 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.77
SCAP-209ENST00000465628 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.77
SCAP-209ENST00000465628 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
SCAP-209ENST00000465628 FAM231BA6NCW3 169 aa10.2□□□□□ -0.78
SCAP-209ENST00000465628 NCR2O95944 276 aa10.2□□□□□ -0.78
SCAP-209ENST00000465628 PMCHP20382 165 aa10.2□□□□□ -0.78
SCAP-209ENST00000465628 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
SCAP-209ENST00000465628 V9GYV3 84 aa10.2□□□□□ -0.78
SCAP-209ENST00000465628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.19□□□□□ -0.78
SCAP-209ENST00000465628 A0A1B0GUV1 79 aa10.19□□□□□ -0.78
SCAP-209ENST00000465628 IGKV2-29A2NJV5 120 aaPredicted RBP10.19□□□□□ -0.78
SCAP-209ENST00000465628 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
SCAP-209ENST00000465628 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
SCAP-209ENST00000465628 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
SCAP-209ENST00000465628 FAT1Q14517 4588 aa10.19□□□□□ -0.78
SCAP-209ENST00000465628 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
SCAP-209ENST00000465628 C9JQL5 133 aa10.18□□□□□ -0.78
SCAP-209ENST00000465628 I3L3M4 83 aa10.18□□□□□ -0.78
SCAP-209ENST00000465628 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
SCAP-209ENST00000465628 NUP35Q8NFH5 326 aa10.18□□□□□ -0.78
SCAP-209ENST00000465628 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
SCAP-209ENST00000465628 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
SCAP-209ENST00000465628 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
SCAP-209ENST00000465628 BTF3L4Q96K17 158 aa10.17□□□□□ -0.78
SCAP-209ENST00000465628 TMEM242Q9NWH2 141 aa10.17□□□□□ -0.78
SCAP-209ENST00000465628 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
SCAP-209ENST00000465628 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
SCAP-209ENST00000465628 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 PRSS1P07477 247 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 FGF6P10767 208 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 RAB14P61106 215 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 Q6ZSA8 131 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 AP5S1Q9NUS5 200 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 DNAH8Q96JB1 4490 aa10.15□□□□□ -0.78
SCAP-209ENST00000465628 TRBV6-5A0A0K0K1A5 114 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 H7C423 109 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 GAS8-AS1O95177 125 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 RAB4AP20338 218 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 FCER1GP30273 86 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 RPS10P46783 165 aaKnown RBP10.14□□□□□ -0.79
SCAP-209ENST00000465628 CAMPP49913 170 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 LINC00528Q8N1L1 170 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
SCAP-209ENST00000465628 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
SCAP-209ENST00000465628 PPP1R17O96001 155 aa10.13□□□□□ -0.79
SCAP-209ENST00000465628 KRTAP26-1Q6PEX3 210 aa10.13□□□□□ -0.79
SCAP-209ENST00000465628 CLRN3Q8NCR9 226 aa10.13□□□□□ -0.79
SCAP-209ENST00000465628 OR5A1Q8NGJ0 315 aa10.13□□□□□ -0.79
SCAP-209ENST00000465628 SMIM27A0A1W2PRY6 76 aa10.12□□□□□ -0.79
SCAP-209ENST00000465628 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
SCAP-209ENST00000465628 TSHBP01222 138 aa10.12□□□□□ -0.79
SCAP-209ENST00000465628 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
SCAP-209ENST00000465628 ZNF25P17030 456 aaPredicted RBP10.12□□□□□ -0.79
SCAP-209ENST00000465628 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
SCAP-209ENST00000465628 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
SCAP-209ENST00000465628 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
SCAP-209ENST00000465628 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
SCAP-209ENST00000465628 A0A1B0GW15 77 aa10.1□□□□□ -0.79
SCAP-209ENST00000465628 S100A8P05109 93 aa10.1□□□□□ -0.79
SCAP-209ENST00000465628 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
SCAP-209ENST00000465628 CFAP161Q6P656 301 aa10.1□□□□□ -0.79
SCAP-209ENST00000465628 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
SCAP-209ENST00000465628 KIR2DL4Q99706 377 aa10.1□□□□□ -0.79
SCAP-209ENST00000465628 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 F8W036 122 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 VCYO14598 125 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 PPP1R2P9O14990 202 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 HBBP68871 147 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 MRPL51Q4U2R6 128 aaKnown RBP10.09□□□□□ -0.79
SCAP-209ENST00000465628 FAM104BQ5XKR9 115 aa10.09□□□□□ -0.79
SCAP-209ENST00000465628 CKS2P33552 79 aa10.08□□□□□ -0.8
SCAP-209ENST00000465628 XCL1P47992 114 aa10.08□□□□□ -0.8
SCAP-209ENST00000465628 SMAGPQ0VAQ4 97 aa10.08□□□□□ -0.8
SCAP-209ENST00000465628 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms