RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 APOC4P55056 127 aa9.85□□□□□ -0.83
HDAC6-215ENST00000465457 RHOHQ15669 191 aa9.85□□□□□ -0.83
HDAC6-215ENST00000465457 RRN3P1Q2M238 152 aa9.85□□□□□ -0.83
HDAC6-215ENST00000465457 CFAP126Q5VTH2 177 aa9.85□□□□□ -0.83
HDAC6-215ENST00000465457 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-215ENST00000465457 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
HDAC6-215ENST00000465457 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 DEFB135Q30KP9 77 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 TOMM6Q96B49 74 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 MRPL16Q9NX20 251 aaKnown RBP9.84□□□□□ -0.83
HDAC6-215ENST00000465457 PAM16Q9Y3D7 125 aa9.84□□□□□ -0.83
HDAC6-215ENST00000465457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-215ENST00000465457 IGHV3-53P01767 116 aa9.83□□□□□ -0.84
HDAC6-215ENST00000465457 AZU1P20160 251 aa9.83□□□□□ -0.84
HDAC6-215ENST00000465457 SPATA45Q537H7 98 aa9.83□□□□□ -0.84
HDAC6-215ENST00000465457 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
HDAC6-215ENST00000465457 TRGV1A0A0A0MS02 117 aa9.82□□□□□ -0.84
HDAC6-215ENST00000465457 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
HDAC6-215ENST00000465457 I3L3M4 83 aa9.82□□□□□ -0.84
HDAC6-215ENST00000465457 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
HDAC6-215ENST00000465457 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
HDAC6-215ENST00000465457 TRBV10-1A0A0K0K1A3 114 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 H0Y8G0 127 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 C2orf66Q6UXQ4 117 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 Q6ZN92 141 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 SCGB3A1Q96QR1 104 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
HDAC6-215ENST00000465457 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 LINC00587B1AMM8 73 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 PRSS1P07477 247 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 ERASQ7Z444 233 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 UQCR10Q9UDW1 63 aa9.8□□□□□ -0.84
HDAC6-215ENST00000465457 PRM2P04554 102 aa9.79□□□□□ -0.84
HDAC6-215ENST00000465457 MRPL52Q86TS9 123 aaKnown RBP9.79□□□□□ -0.84
HDAC6-215ENST00000465457 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
HDAC6-215ENST00000465457 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
HDAC6-215ENST00000465457 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
HDAC6-215ENST00000465457 NPSP0C0P6 89 aa9.78□□□□□ -0.84
HDAC6-215ENST00000465457 PLNP26678 52 aa9.78□□□□□ -0.84
HDAC6-215ENST00000465457 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
HDAC6-215ENST00000465457 ODF1Q14990 250 aa9.78□□□□□ -0.84
HDAC6-215ENST00000465457 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
HDAC6-215ENST00000465457 DPM2O94777 84 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 TSHBP01222 138 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 PAPPA-AS1Q5QFB9 102 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 Q6ZTI0 123 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.85
HDAC6-215ENST00000465457 TRGV2A0A075B6R0 118 aa9.76□□□□□ -0.85
HDAC6-215ENST00000465457 A0A087WX48 190 aa9.76□□□□□ -0.85
HDAC6-215ENST00000465457 IGHV3-73A0A0B4J1V6 119 aa9.76□□□□□ -0.85
HDAC6-215ENST00000465457 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
HDAC6-215ENST00000465457 LRP1BQ9NZR2 4599 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 K7EQD1 137 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 RTL8CO15255 209 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 IGKCP01834 107 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
HDAC6-215ENST00000465457 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
HDAC6-215ENST00000465457 PMCHL2Q9BQD1 86 aa9.75□□□□□ -0.85
HDAC6-215ENST00000465457 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 PRSS29PA6NIE9 313 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 F8VRH5 84 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 COTL1Q14019 142 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 RNF183Q96D59 192 aa9.74□□□□□ -0.85
HDAC6-215ENST00000465457 TRBV7-3A0A075B6L6 115 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 hDV102S1A0JD36 115 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 GAGE12BA1L429 117 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 GAGE7O76087 117 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 GAGE12FP0CL80 117 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 GAGE12GP0CL81 117 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 GAGE12IP0CL82 117 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 MIFP14174 115 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 CRYBA4P53673 196 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-215ENST00000465457 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
HDAC6-215ENST00000465457 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
HDAC6-215ENST00000465457 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 PYGO1Q9Y3Y4 419 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 X6R8D5 127 aa9.73□□□□□ -0.85
HDAC6-215ENST00000465457 APOBP04114 4563 aaKnown RBP9.73□□□□□ -0.85
HDAC6-215ENST00000465457 HNRNPA3P51991 378 aaKnown RBP9.72□□□□□ -0.85
HDAC6-215ENST00000465457 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
HDAC6-215ENST00000465457 SLC25A34Q6PIV7 304 aa9.72□□□□□ -0.85
HDAC6-215ENST00000465457 Q6ZSN1 163 aa9.72□□□□□ -0.85
HDAC6-215ENST00000465457 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
HDAC6-215ENST00000465457 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
HDAC6-215ENST00000465457 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms