RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF56Q15929 161 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 FAM74A4Q5TZK3 123 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 H7C1H1 209 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 PRSS1P07477 247 aa12□□□□□ -0.49
EXOSC3-203ENST00000465229 TRAV12-1A0A0B4J245 112 aa11.99□□□□□ -0.49
EXOSC3-203ENST00000465229 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
EXOSC3-203ENST00000465229 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-203ENST00000465229 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
EXOSC3-203ENST00000465229 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
EXOSC3-203ENST00000465229 EREGO14944 169 aa11.98□□□□□ -0.49
EXOSC3-203ENST00000465229 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
EXOSC3-203ENST00000465229 UFSP1Q6NVU6 142 aa11.98□□□□□ -0.49
EXOSC3-203ENST00000465229 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
EXOSC3-203ENST00000465229 RHODO00212 210 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 DAD1P61803 113 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 C11orf45Q8TAV5 145 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 TRGV2A0A075B6R0 118 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 A0A087WX48 190 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 COX8AP10176 69 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 ERASQ7Z444 233 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
EXOSC3-203ENST00000465229 DPM2O94777 84 aa11.96□□□□□ -0.5
EXOSC3-203ENST00000465229 NANOS2P60321 138 aaKnown RBP11.96□□□□□ -0.5
EXOSC3-203ENST00000465229 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.5
EXOSC3-203ENST00000465229 CYSLTR1Q9Y271 337 aa11.96□□□□□ -0.5
EXOSC3-203ENST00000465229 IGKCP01834 107 aa11.95□□□□□ -0.5
EXOSC3-203ENST00000465229 RHOHQ15669 191 aa11.95□□□□□ -0.5
EXOSC3-203ENST00000465229 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
EXOSC3-203ENST00000465229 RS1O15537 224 aa11.94□□□□□ -0.5
EXOSC3-203ENST00000465229 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
EXOSC3-203ENST00000465229 NACAE9PAV3 2078 aa11.94□□□□□ -0.5
EXOSC3-203ENST00000465229 TRAV4A0A0B4J268 109 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 IGHV3-53P01767 116 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 ANKRD39Q53RE8 183 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 Q6ZTC4 211 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 OR4C5Q8NGB2 326 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 I3L3M4 83 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 DLEU1O43261 78 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 PLNP26678 52 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 NEXN-AS1Q8NBZ9 246 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
EXOSC3-203ENST00000465229 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
EXOSC3-203ENST00000465229 MRPL35Q9NZE8 188 aaKnown RBP11.92□□□□□ -0.5
EXOSC3-203ENST00000465229 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
EXOSC3-203ENST00000465229 F8VRH5 84 aa11.91□□□□□ -0.5
EXOSC3-203ENST00000465229 ATP5G1P05496 136 aa11.91□□□□□ -0.5
EXOSC3-203ENST00000465229 STPG4Q8N801 248 aa11.91□□□□□ -0.5
EXOSC3-203ENST00000465229 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
EXOSC3-203ENST00000465229 IGHV3-73A0A0B4J1V6 119 aa11.9□□□□□ -0.5
EXOSC3-203ENST00000465229 FGF6P10767 208 aa11.9□□□□□ -0.5
EXOSC3-203ENST00000465229 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
EXOSC3-203ENST00000465229 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
EXOSC3-203ENST00000465229 TSHBP01222 138 aa11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 FHL2Q14192 279 aa11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 SIVA1O15304 175 aa11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 CIDEAO60543 219 aa11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 HTN3P15516 51 aa11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 CHTOPQ9Y3Y2 248 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-203ENST00000465229 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
EXOSC3-203ENST00000465229 Q6ZSN1 163 aa11.88□□□□□ -0.51
EXOSC3-203ENST00000465229 TNFRSF18Q9Y5U5 241 aa11.88□□□□□ -0.51
EXOSC3-203ENST00000465229 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
EXOSC3-203ENST00000465229 F5H768 121 aa11.87□□□□□ -0.51
EXOSC3-203ENST00000465229 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
EXOSC3-203ENST00000465229 DEFB131BA0A096LNP1 70 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 A0A1B0GV90 55 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 P0DMU3 169 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 FAM231AP0DMU4 169 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 FAM231CP0DMU5 169 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 PMVKQ15126 192 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
EXOSC3-203ENST00000465229 NPSP0C0P6 89 aa11.85□□□□□ -0.51
EXOSC3-203ENST00000465229 RPL39P62891 51 aaKnown RBP11.85□□□□□ -0.51
EXOSC3-203ENST00000465229 BATFQ16520 125 aa11.85□□□□□ -0.51
EXOSC3-203ENST00000465229 PHLDA1Q8WV24 401 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-203ENST00000465229 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
EXOSC3-203ENST00000465229 TP73-AS1Q9UF72 201 aa11.84□□□□□ -0.51
EXOSC3-203ENST00000465229 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
EXOSC3-203ENST00000465229 NMUP48645 174 aa11.83□□□□□ -0.52
EXOSC3-203ENST00000465229 HINT1P49773 126 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-203ENST00000465229 CRYBA4P53673 196 aa11.83□□□□□ -0.52
EXOSC3-203ENST00000465229 CST9LQ9H4G1 147 aa11.83□□□□□ -0.52
EXOSC3-203ENST00000465229 PYGO1Q9Y3Y4 419 aa11.83□□□□□ -0.52
EXOSC3-203ENST00000465229 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 TRBV6-4A0A1B0GX49 114 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 WWC2-AS2Q96NR7 200 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 Q9UF83 564 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 PCP2Q8IVA1 136 aa11.82□□□□□ -0.52
EXOSC3-203ENST00000465229 HIGD1BQ9P298 99 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms