RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
VPS52-214ENST00000463486 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
VPS52-214ENST00000463486 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
VPS52-214ENST00000463486 KCNIP4Q6PIL6 250 aa11.75□□□□□ -0.53
VPS52-214ENST00000463486 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
VPS52-214ENST00000463486 MT-ND4LP03901 98 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 COTL1Q14019 142 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 ELOBQ15370 118 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 TMEM70Q9BUB7 260 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 PRR34Q9NV39 138 aa11.74□□□□□ -0.53
VPS52-214ENST00000463486 NCR2O95944 276 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 PKIAP61925 76 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 HBBP68871 147 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 WFDC2Q14508 124 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 SEC11CQ9BY50 192 aa11.73□□□□□ -0.53
VPS52-214ENST00000463486 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 A0A1B0GUV1 79 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 F8W036 122 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 TSHBP01222 138 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 FUSP35637 526 aaKnown RBP eCLIP11.72□□□□□ -0.53
VPS52-214ENST00000463486 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 ST20Q9HBF5 79 aa11.72□□□□□ -0.53
VPS52-214ENST00000463486 I3L3M4 83 aa11.71□□□□□ -0.53
VPS52-214ENST00000463486 ANGP03950 147 aaKnown RBP11.71□□□□□ -0.53
VPS52-214ENST00000463486 AMTP48728 403 aa11.71□□□□□ -0.53
VPS52-214ENST00000463486 ATP5L2Q7Z4Y8 100 aa11.71□□□□□ -0.53
VPS52-214ENST00000463486 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 C16orf90A8MZG2 172 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 PSCAO43653 123 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 ESDP10768 282 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 LINC00269Q8N2A0 174 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
VPS52-214ENST00000463486 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
VPS52-214ENST00000463486 Q0VG73 95 aa11.69□□□□□ -0.54
VPS52-214ENST00000463486 EREGO14944 169 aa11.68□□□□□ -0.54
VPS52-214ENST00000463486 S100A8P05109 93 aa11.68□□□□□ -0.54
VPS52-214ENST00000463486 PMCHP20382 165 aa11.68□□□□□ -0.54
VPS52-214ENST00000463486 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
VPS52-214ENST00000463486 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
VPS52-214ENST00000463486 COX11Q9Y6N1 276 aa11.68□□□□□ -0.54
VPS52-214ENST00000463486 IGKV2D-24A0A075B6R9 120 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 PPP1R17O96001 155 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 MIAQ16674 131 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 Q8N814 137 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 RMI2Q96E14 147 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 TMEM242Q9NWH2 141 aa11.67□□□□□ -0.54
VPS52-214ENST00000463486 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
VPS52-214ENST00000463486 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
VPS52-214ENST00000463486 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
VPS52-214ENST00000463486 H7C423 109 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 VCYO14598 125 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 APCSP02743 223 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 CKS2P33552 79 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 CTDSP1Q9GZU7 261 aa11.66□□□□□ -0.54
VPS52-214ENST00000463486 D6R8Y8 96 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
VPS52-214ENST00000463486 REG3AQ06141 175 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 CDPF1Q6NVV7 123 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
VPS52-214ENST00000463486 LECT2O14960 151 aa11.64□□□□□ -0.55
VPS52-214ENST00000463486 NPYP01303 97 aa11.64□□□□□ -0.55
VPS52-214ENST00000463486 CRPP02741 224 aa11.64□□□□□ -0.55
VPS52-214ENST00000463486 FGF6P10767 208 aa11.64□□□□□ -0.55
VPS52-214ENST00000463486 C1orf43Q9BWL3 253 aa11.64□□□□□ -0.55
VPS52-214ENST00000463486 UBE2L6O14933 153 aa11.63□□□□□ -0.55
VPS52-214ENST00000463486 PPBPP02775 128 aa11.63□□□□□ -0.55
VPS52-214ENST00000463486 KRTAP17-1Q9BYP8 105 aa11.63□□□□□ -0.55
VPS52-214ENST00000463486 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
VPS52-214ENST00000463486 PHOX2AO14813 284 aa11.62□□□□□ -0.55
VPS52-214ENST00000463486 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
VPS52-214ENST00000463486 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
VPS52-214ENST00000463486 FAT1Q14517 4588 aa11.62□□□□□ -0.55
VPS52-214ENST00000463486 TMEM136Q6ZRR5 245 aa11.61□□□□□ -0.55
VPS52-214ENST00000463486 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
VPS52-214ENST00000463486 ORMDL3Q8N138 153 aa11.61□□□□□ -0.55
VPS52-214ENST00000463486 CLRN3Q8NCR9 226 aa11.61□□□□□ -0.55
VPS52-214ENST00000463486 CDK2AP2O75956 126 aa11.6□□□□□ -0.55
VPS52-214ENST00000463486 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
VPS52-214ENST00000463486 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 TRAV9-1A0A075B6T8 112 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 TRAV8-4A0A0B4J246 113 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 PRSS47A8MTI9 375 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
VPS52-214ENST00000463486 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 PRELID3AQ96N28 172 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 KIR2DL4Q99706 377 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 ABCA13Q86UQ4 5058 aa11.59□□□□□ -0.55
VPS52-214ENST00000463486 PCLOQ9Y6V0 5065 aa11.58□□□□□ -0.56
VPS52-214ENST00000463486 RHEBQ15382 184 aa11.58□□□□□ -0.56
VPS52-214ENST00000463486 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
VPS52-214ENST00000463486 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms