RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TMSB15BA0A087X1C1 80 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 TRAV26-2A0A0B4J265 109 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 MPC2O95563 127 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 RPL12P30050 165 aaKnown RBP4.64□□□□□ -1.67
SMC3-202ENST00000462899 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.64□□□□□ -1.67
SMC3-202ENST00000462899 ZNF471Q9BX82 626 aaPredicted RBP4.64□□□□□ -1.67
SMC3-202ENST00000462899 MED28Q9H204 178 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 ZFP30Q9Y2G7 519 aa4.64□□□□□ -1.67
SMC3-202ENST00000462899 M0QY20 66 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 CXorf1O96002 111 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 LTAP01374 205 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 OR5AL1P0C617 328 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 CACNG7P62955 275 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 CYCSP99999 105 aaKnown RBP4.63□□□□□ -1.67
SMC3-202ENST00000462899 HIST1H2BAQ96A08 127 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 PSMG3Q9BT73 122 aaPredicted RBP4.63□□□□□ -1.67
SMC3-202ENST00000462899 TMEM243Q9BU79 118 aa4.63□□□□□ -1.67
SMC3-202ENST00000462899 IGLV1-50A0A075B6I6 118 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 A0A1W2PNN7 141 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 FAM74A7A6NL05 159 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 ZNF726P1Q15940 193 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 PRR4Q16378 134 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 FMC1Q96HJ9 113 aa4.62□□□□□ -1.67
SMC3-202ENST00000462899 H0Y9J4 135 aa4.61□□□□□ -1.67
SMC3-202ENST00000462899 TRIAP1O43715 76 aa4.61□□□□□ -1.67
SMC3-202ENST00000462899 ATP6V0CP27449 155 aa4.61□□□□□ -1.67
SMC3-202ENST00000462899 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
SMC3-202ENST00000462899 CARD19Q96LW7 228 aa4.61□□□□□ -1.67
SMC3-202ENST00000462899 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
SMC3-202ENST00000462899 MUC21A0A140T8X8 626 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 FAM240BA0A1B0GVZ2 78 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 PET100P0DJ07 73 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 AMTP48728 403 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 SULT1A2P50226 295 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 SERF2P84101 59 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 SUMO4Q6EEV6 95 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 FER1L6-AS1Q8NA97 138 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 DIRC1Q969H9 104 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 LINC00526Q96FQ7 95 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 AP1S3Q96PC3 154 aa4.6□□□□□ -1.67
SMC3-202ENST00000462899 MBP02144 154 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 NKX2-5P52952 324 aaPredicted RBP4.59□□□□□ -1.67
SMC3-202ENST00000462899 UBE2G2P60604 165 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 C1orf137Q5JT78 98 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 CCDC32Q9BV29 185 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 NKX6-2Q9C056 277 aaPredicted RBP4.59□□□□□ -1.67
SMC3-202ENST00000462899 ACTR3CQ9C0K3 210 aaPredicted RBP4.59□□□□□ -1.67
SMC3-202ENST00000462899 TNFSF18Q9UNG2 199 aa4.59□□□□□ -1.67
SMC3-202ENST00000462899 CCDC160A6NGH7 325 aa4.58□□□□□ -1.68
SMC3-202ENST00000462899 MT-ND6P03923 174 aa4.58□□□□□ -1.68
SMC3-202ENST00000462899 UBE2G1P62253 170 aa4.58□□□□□ -1.68
SMC3-202ENST00000462899 SPANXN1Q5VSR9 72 aa4.58□□□□□ -1.68
SMC3-202ENST00000462899 PHF5AQ7RTV0 110 aaKnown RBP4.58□□□□□ -1.68
SMC3-202ENST00000462899 TCEAL7Q9BRU2 100 aa4.58□□□□□ -1.68
SMC3-202ENST00000462899 IGHV1-58A0A0C4DH39 117 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 IGKV3OR2-268A0A0C4DH90 116 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 CTXND1A0A1B0GTU2 59 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 UBE2L6O14933 153 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 IGLC6P0CF74 106 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 FHITP49789 147 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 DEFA3P59666 94 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 SYCNQ0VAF6 134 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 C9orf116Q5BN46 136 aaPredicted RBP4.57□□□□□ -1.68
SMC3-202ENST00000462899 RASL11AQ6T310 242 aa4.57□□□□□ -1.68
SMC3-202ENST00000462899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.56□□□□□ -1.68
SMC3-202ENST00000462899 SMIM17P0DL12 118 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 BCL2P10415 239 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
SMC3-202ENST00000462899 MEF2BQ02080 365 aaPredicted RBP4.56□□□□□ -1.68
SMC3-202ENST00000462899 GAGE2BQ13066 116 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 COTL1Q14019 142 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 NUP35Q8NFH5 326 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 OR5A1Q8NGJ0 315 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 NIT2Q9NQR4 276 aa4.56□□□□□ -1.68
SMC3-202ENST00000462899 H7C423 109 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 MGPP08493 103 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 FGF6P10767 208 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 NTF3P20783 257 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 CAMPP49913 170 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 MARVELD1Q9BSK0 173 aa4.55□□□□□ -1.68
SMC3-202ENST00000462899 RPP21Q9H633 154 aaKnown RBP4.55□□□□□ -1.68
SMC3-202ENST00000462899 CARHSP1Q9Y2V2 147 aaKnown RBP4.55□□□□□ -1.68
SMC3-202ENST00000462899 LINC00959A0A1B0GUT2 108 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 CCL25O15444 150 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 APOMO95445 188 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 AKR1C3P42330 323 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 XCL1P47992 114 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 SSTP61278 116 aa4.54□□□□□ -1.68
SMC3-202ENST00000462899 IGLV4-69A0A075B6H9 119 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.53□□□□□ -1.68
SMC3-202ENST00000462899 TRAV1-1A0A0B4J248 108 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 IGKV2-29A2NJV5 120 aaPredicted RBP4.53□□□□□ -1.68
SMC3-202ENST00000462899 INMT-MINDY4F8WBC2 141 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms