RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 IGLL5B9A064 214 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 NUDT3O95989 172 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
RTF1-202ENST00000462276 PKIAP61925 76 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 SMAGPQ0VAQ4 97 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 NIT1Q86X76 327 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
RTF1-202ENST00000462276 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 IGHV1-24A0A0C4DH33 117 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 H7C423 109 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 S100A6P06703 90 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 LAGE3Q14657 143 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
RTF1-202ENST00000462276 NACAE9PAV3 2078 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 TRBV25-1A0A075B6N4 114 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 C3orf84H3BNL1 204 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 TSHBP01222 138 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 ESDP10768 282 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 LELP1Q5T871 98 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
RTF1-202ENST00000462276 HSBP1O75506 76 aa7.39□□□□□ -1.23
RTF1-202ENST00000462276 AMTP48728 403 aa7.39□□□□□ -1.23
RTF1-202ENST00000462276 CCL18P55774 89 aa7.39□□□□□ -1.23
RTF1-202ENST00000462276 NDUFA6P56556 154 aa7.39□□□□□ -1.23
RTF1-202ENST00000462276 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
RTF1-202ENST00000462276 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
RTF1-202ENST00000462276 TRAV8-6A0A0B4J262 113 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 SERF1AO75920 110 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 NPSP0C0P6 89 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 C20orf203Q8NBC4 194 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
RTF1-202ENST00000462276 APLNQ9ULZ1 77 aa7.38□□□□□ -1.23
RTF1-202ENST00000462276 HBDP02042 147 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 NTM-AS1Q6ZSK4 140 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 URB1-AS1Q96HZ7 61 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 CHCHD7Q9BUK0 85 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 CYSLTR1Q9Y271 337 aa7.37□□□□□ -1.23
RTF1-202ENST00000462276 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
RTF1-202ENST00000462276 UBE2L6O14933 153 aa7.36□□□□□ -1.23
RTF1-202ENST00000462276 ZNF25P17030 456 aaPredicted RBP7.36□□□□□ -1.23
RTF1-202ENST00000462276 ESRGQ1W209 222 aa7.36□□□□□ -1.23
RTF1-202ENST00000462276 TOMM6Q96B49 74 aa7.36□□□□□ -1.23
RTF1-202ENST00000462276 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
RTF1-202ENST00000462276 MRPS16Q9Y3D3 137 aaKnown RBP7.36□□□□□ -1.23
RTF1-202ENST00000462276 PYGO1Q9Y3Y4 419 aa7.36□□□□□ -1.23
RTF1-202ENST00000462276 A0A1B0GUV1 79 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 K7EP13 123 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
RTF1-202ENST00000462276 PAPPA-AS1Q5QFB9 102 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
RTF1-202ENST00000462276 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 HSPB8Q9UJY1 196 aa7.35□□□□□ -1.23
RTF1-202ENST00000462276 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 ATP5LO75964 103 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 LINC00310P59036 64 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 ZFAND6Q6FIF0 208 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 DGAT2L7PQ6IED9 249 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 ERASQ7Z444 233 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 TMEM101Q96IK0 257 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 TIMM17AQ99595 171 aa7.34□□□□□ -1.23
RTF1-202ENST00000462276 A0A087WX48 190 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 TMEM262E9PQX1 116 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 S100A2P29034 98 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 LINC00588Q9Y4M8 146 aa7.33□□□□□ -1.24
RTF1-202ENST00000462276 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.32□□□□□ -1.24
RTF1-202ENST00000462276 NUPR1O60356 82 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 LEPROTL1O95214 131 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 FGF6P10767 208 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
RTF1-202ENST00000462276 MRPS36P82909 103 aaKnown RBP7.32□□□□□ -1.24
RTF1-202ENST00000462276 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 OR5A1Q8NGJ0 315 aa7.32□□□□□ -1.24
RTF1-202ENST00000462276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
RTF1-202ENST00000462276 TRAV9-2A0A087WT02 112 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 A0A096LNJ9 63 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
RTF1-202ENST00000462276 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 GAGE6Q13070 117 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 Q6ZN92 141 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 FAM19A2Q8N3H0 131 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 TMA7Q9Y2S6 64 aaKnown RBP7.31□□□□□ -1.24
RTF1-202ENST00000462276 UBE2D4Q9Y2X8 147 aa7.31□□□□□ -1.24
RTF1-202ENST00000462276 RYR2Q92736 4967 aa7.3□□□□□ -1.24
RTF1-202ENST00000462276 SIVA1O15304 175 aa7.3□□□□□ -1.24
RTF1-202ENST00000462276 RBX1P62877 108 aa7.3□□□□□ -1.24
RTF1-202ENST00000462276 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms