RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
HPS3-204ENST00000462030 CCL19Q99731 98 aa13.49□□□□□ -0.25
HPS3-204ENST00000462030 ICOSQ9Y6W8 199 aa13.49□□□□□ -0.25
HPS3-204ENST00000462030 CELSR2Q9HCU4 2923 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 SPG11Q96JI7 2443 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 SNCGO76070 127 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 SPANXCQ9NY87 97 aa13.48□□□□□ -0.25
HPS3-204ENST00000462030 NHLRC4P0CG21 123 aaPredicted RBP13.47□□□□□ -0.25
HPS3-204ENST00000462030 GNLYP22749 145 aa13.47□□□□□ -0.25
HPS3-204ENST00000462030 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
HPS3-204ENST00000462030 LINC01600Q96MT4 127 aa13.47□□□□□ -0.25
HPS3-204ENST00000462030 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
HPS3-204ENST00000462030 H3BMM0 161 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 MIAQ16674 131 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 Q6ZSN1 163 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 EDA2RQ9HAV5 297 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 TNFRSF18Q9Y5U5 241 aa13.46□□□□□ -0.25
HPS3-204ENST00000462030 TRAV8-4A0A0B4J246 113 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 ATP5J2P56134 94 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 GAGE2BQ13066 116 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 GAGE2EQ4V326 116 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 C2orf82Q6UX34 121 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 GAGE2DQ9UEU5 116 aa13.46□□□□□ -0.26
HPS3-204ENST00000462030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.45□□□□□ -0.26
HPS3-204ENST00000462030 IGKV2-29A2NJV5 120 aaPredicted RBP13.45□□□□□ -0.26
HPS3-204ENST00000462030 H7C423 109 aa13.45□□□□□ -0.26
HPS3-204ENST00000462030 CLEC2BQ92478 149 aa13.45□□□□□ -0.26
HPS3-204ENST00000462030 CHCHD7Q9BUK0 85 aa13.45□□□□□ -0.26
HPS3-204ENST00000462030 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
HPS3-204ENST00000462030 UBE2D4Q9Y2X8 147 aa13.44□□□□□ -0.26
HPS3-204ENST00000462030 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
HPS3-204ENST00000462030 RNF152Q8N8N0 203 aa13.44□□□□□ -0.26
HPS3-204ENST00000462030 DAND5Q8N907 189 aa13.43□□□□□ -0.26
HPS3-204ENST00000462030 SS18L2Q9UHA2 77 aa13.42□□□□□ -0.26
HPS3-204ENST00000462030 IGHV3-38A0A0C4DH36 116 aa13.42□□□□□ -0.26
HPS3-204ENST00000462030 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
HPS3-204ENST00000462030 NDUFV3P56181 108 aaKnown RBP13.42□□□□□ -0.26
HPS3-204ENST00000462030 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
HPS3-204ENST00000462030 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
HPS3-204ENST00000462030 C15orf53Q8NAA6 179 aa13.41□□□□□ -0.26
HPS3-204ENST00000462030 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
HPS3-204ENST00000462030 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
HPS3-204ENST00000462030 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
HPS3-204ENST00000462030 DUX3Q96PT4 197 aa13.41□□□□□ -0.26
HPS3-204ENST00000462030 CREBBPQ92793 2442 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 DEFB131AP59861 70 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 GAGE5Q13069 117 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 GAGE6Q13070 117 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 COX6CP09669 75 aa13.4□□□□□ -0.26
HPS3-204ENST00000462030 B5MCH6 92 aa13.39□□□□□ -0.27
HPS3-204ENST00000462030 B4DSR2 109 aa13.39□□□□□ -0.27
HPS3-204ENST00000462030 CDKN2A-AS1Q9UH64 79 aa13.39□□□□□ -0.27
HPS3-204ENST00000462030 H3BT86 120 aa13.38□□□□□ -0.27
HPS3-204ENST00000462030 LST1O00453 97 aa13.38□□□□□ -0.27
HPS3-204ENST00000462030 TMEM89A2RUT3 159 aa13.38□□□□□ -0.27
HPS3-204ENST00000462030 TTC32Q5I0X7 151 aa13.37□□□□□ -0.27
HPS3-204ENST00000462030 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
HPS3-204ENST00000462030 IFITM1P13164 125 aa13.37□□□□□ -0.27
HPS3-204ENST00000462030 CSMD2Q7Z408 3487 aa13.36□□□□□ -0.27
HPS3-204ENST00000462030 Q6Q795 121 aa13.36□□□□□ -0.27
HPS3-204ENST00000462030 YAE1D1Q9NRH1 226 aa13.36□□□□□ -0.27
HPS3-204ENST00000462030 DEFB136Q30KP8 78 aa13.36□□□□□ -0.27
HPS3-204ENST00000462030 CCDC179H3BU77 68 aa13.35□□□□□ -0.27
HPS3-204ENST00000462030 SLURP1P55000 103 aa13.35□□□□□ -0.27
HPS3-204ENST00000462030 ZNF415Q09FC8 603 aa13.35□□□□□ -0.27
HPS3-204ENST00000462030 C18orf65Q6ZTR6 163 aa13.35□□□□□ -0.27
HPS3-204ENST00000462030 TMEM101Q96IK0 257 aa13.35□□□□□ -0.27
HPS3-204ENST00000462030 TIMM17BO60830 172 aa13.34□□□□□ -0.27
HPS3-204ENST00000462030 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
HPS3-204ENST00000462030 COX6A2Q02221 97 aa13.34□□□□□ -0.27
HPS3-204ENST00000462030 NDUFA1O15239 70 aa13.33□□□□□ -0.28
HPS3-204ENST00000462030 NRGNQ92686 78 aa13.33□□□□□ -0.28
HPS3-204ENST00000462030 A8MTW9 85 aa13.33□□□□□ -0.28
HPS3-204ENST00000462030 PKD1L2Q7Z442 2459 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 IGHV3-53P01767 116 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 UBE2E2Q96LR5 201 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 CFAP46Q8IYW2 2715 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 A0A0U1RRA0 63 aa13.32□□□□□ -0.28
HPS3-204ENST00000462030 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
HPS3-204ENST00000462030 FLNCQ14315 2725 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 PRORYQ9H606 182 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE12JA6NER3 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE7O76087 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 TIRAPP58753 221 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 GAGE4Q13068 117 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 LINC01587Q99440 93 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
HPS3-204ENST00000462030 PIK3CD-AS1Q5SR53 167 aa13.3□□□□□ -0.28
HPS3-204ENST00000462030 MAPK1IP1LQ8NDC0 245 aa13.3□□□□□ -0.28
HPS3-204ENST00000462030 Q9H8V8 135 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms