RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
COL4A6-204ENST00000461897 F8P00451 2351 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 SORL1Q92673 2214 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 TSPAN13O95857 204 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 SIGMAR1Q99720 223 aa9.12□□□□□ -0.95
COL4A6-204ENST00000461897 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 TRAV2A0A0B4J234 112 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 TRPT1Q86TN4 253 aaKnown RBP9.11□□□□□ -0.95
COL4A6-204ENST00000461897 NDUFA11Q86Y39 141 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 F5H697 171 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
COL4A6-204ENST00000461897 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-204ENST00000461897 Q8N1Y9 231 aa9.1□□□□□ -0.95
COL4A6-204ENST00000461897 BAHCC1Q9P281 2608 aa9.1□□□□□ -0.95
COL4A6-204ENST00000461897 J3QQQ9 107 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 P0DMU3 169 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 FAM231AP0DMU4 169 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 FAM231CP0DMU5 169 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 C20orf203Q8NBC4 194 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
COL4A6-204ENST00000461897 TRBV20-1A0A075B6N2 111 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 LEPROTO15243 131 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 IGKV3-20P01619 116 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 AZU1P20160 251 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 DEFB131AP59861 70 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 CFC1P0CG37 223 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 EMP1P54849 157 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 ZNF56Q15929 161 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 TMEM170BQ5T4T1 132 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
COL4A6-204ENST00000461897 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 A8MTW9 85 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 I3L3M4 83 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 CRYBA4P53673 196 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 FOXI1Q12951 378 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
COL4A6-204ENST00000461897 TRAV12-2A0A075B6T6 113 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 APOMO95445 188 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
COL4A6-204ENST00000461897 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 GTSF1LQ9H1H1 148 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 M0QXV9 152 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-204ENST00000461897 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
COL4A6-204ENST00000461897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-204ENST00000461897 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
COL4A6-204ENST00000461897 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
COL4A6-204ENST00000461897 H3BMM0 161 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 RHODO00212 210 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
COL4A6-204ENST00000461897 INSL3P51460 131 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 ODF3L2Q3SX64 289 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 MTURNQ8N3F0 131 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 PTH2Q96A98 100 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 PRO1854Q9UHT4 67 aa9.05□□□□□ -0.96
COL4A6-204ENST00000461897 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 PSMB2P49721 201 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 VWFP04275 2813 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 LOC107984156A0A0G2JMH3 177 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 TCL1BO95988 128 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 ARL17AQ8IVW1 177 aa9.04□□□□□ -0.96
COL4A6-204ENST00000461897 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
COL4A6-204ENST00000461897 SMAGPQ0VAQ4 97 aa9.03□□□□□ -0.96
COL4A6-204ENST00000461897 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
COL4A6-204ENST00000461897 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
COL4A6-204ENST00000461897 OPRPNQ99935 248 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-204ENST00000461897 VCX2Q9H322 139 aa9.03□□□□□ -0.96
COL4A6-204ENST00000461897 JMJD1CQ15652 2540 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 M0R2P5 195 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.96
COL4A6-204ENST00000461897 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 TMEM263Q8WUH6 116 aaKnown RBP9.02□□□□□ -0.96
COL4A6-204ENST00000461897 PPDPFLQ8WWR9 84 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 LINC01600Q96MT4 127 aa9.02□□□□□ -0.96
COL4A6-204ENST00000461897 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-204ENST00000461897 IGHV3-33P01772 117 aa9.02□□□□□ -0.97
COL4A6-204ENST00000461897 PF4P02776 101 aa9.02□□□□□ -0.97
COL4A6-204ENST00000461897 RBMY1A1P0DJD3 496 aaKnown RBP9.02□□□□□ -0.97
COL4A6-204ENST00000461897 RBMY1CP0DJD4 496 aa9.02□□□□□ -0.97
COL4A6-204ENST00000461897 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
COL4A6-204ENST00000461897 CDIP1Q9H305 208 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms