RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 PACRGQ96M98 296 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-203ENST00000461654 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 HBDP02042 147 aa10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 GYPEP15421 78 aa10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 COTL1Q14019 142 aa10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 CEMP1Q6PRD7 247 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
TMEM39A-203ENST00000461654 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 UBE2D3P61077 147 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 UBE2D2P62837 147 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 PMCHL1Q16048 86 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 Q6ZTC4 211 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 Q9UF83 564 aa10.64□□□□□ -0.71
TMEM39A-203ENST00000461654 NACAE9PAV3 2078 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 TRAV26-1A0A087WT03 109 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 A0A0J9YY99 117 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 LOC100131303A0A0U1RQF7 123 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
TMEM39A-203ENST00000461654 DEFB131BA0A096LNP1 70 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 IGHV3-38A0A0C4DH36 116 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 TSHBP01222 138 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 AKR1D1P51857 326 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-203ENST00000461654 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 MRPL23Q16540 153 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 OR10D4PQ8NGN7 298 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 VSIG2Q96IQ7 327 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 CYSLTR1Q9Y271 337 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
TMEM39A-203ENST00000461654 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
TMEM39A-203ENST00000461654 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
TMEM39A-203ENST00000461654 H3BNG1 76 aa10.6□□□□□ -0.71
TMEM39A-203ENST00000461654 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
TMEM39A-203ENST00000461654 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
TMEM39A-203ENST00000461654 LINC00694P0DN24 101 aa10.59□□□□□ -0.71
TMEM39A-203ENST00000461654 C2orf66Q6UXQ4 117 aa10.59□□□□□ -0.71
TMEM39A-203ENST00000461654 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
TMEM39A-203ENST00000461654 ATP5LO75964 103 aa10.58□□□□□ -0.72
TMEM39A-203ENST00000461654 SMAGPQ0VAQ4 97 aa10.58□□□□□ -0.72
TMEM39A-203ENST00000461654 TOMM6Q96B49 74 aa10.58□□□□□ -0.72
TMEM39A-203ENST00000461654 MAP1LC3CQ9BXW4 147 aa10.58□□□□□ -0.72
TMEM39A-203ENST00000461654 LYSTQ99698 3801 aa10.58□□□□□ -0.72
TMEM39A-203ENST00000461654 TRBV25-1A0A075B6N4 114 aa10.57□□□□□ -0.72
TMEM39A-203ENST00000461654 A0A096LNJ9 63 aa10.57□□□□□ -0.72
TMEM39A-203ENST00000461654 KRTDAPP60985 99 aa10.57□□□□□ -0.72
TMEM39A-203ENST00000461654 C20orf203Q8NBC4 194 aa10.57□□□□□ -0.72
TMEM39A-203ENST00000461654 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
TMEM39A-203ENST00000461654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-203ENST00000461654 UBE2L6O14933 153 aa10.56□□□□□ -0.72
TMEM39A-203ENST00000461654 A0A096LPF7 62 aa10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 TCTAP57738 103 aa10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 ERASQ7Z444 233 aa10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 PLECQ15149 4684 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-203ENST00000461654 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 LY6G6CO95867 125 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 Q6ZN92 141 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 TMEM141Q96I45 108 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 HYDINQ4G0P3 5121 aa10.54□□□□□ -0.72
TMEM39A-203ENST00000461654 C20orf202A1L168 122 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 H7C423 109 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 CHCHD5Q9BSY4 110 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 SPANXA1Q9NS26 97 aa10.53□□□□□ -0.72
TMEM39A-203ENST00000461654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 PRSS1P07477 247 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 LINC00173Q6ZV60 143 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 TIMM17AQ99595 171 aa10.52□□□□□ -0.73
TMEM39A-203ENST00000461654 H0Y8G0 127 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 SCGB1D1O95968 90 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 PET117Q6UWS5 81 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
TMEM39A-203ENST00000461654 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
TMEM39A-203ENST00000461654 NPSP0C0P6 89 aa10.5□□□□□ -0.73
TMEM39A-203ENST00000461654 PKIAP61925 76 aa10.5□□□□□ -0.73
TMEM39A-203ENST00000461654 TIMM21Q9BVV7 248 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms