RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CDC42SE1Q9NRR8 79 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 ADGRB1O14514 1584 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 UBR2Q8IWV8 1755 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 DLEC1Q9Y238 1755 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 TRPM7Q96QT4 1865 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 POLEQ07864 2286 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 CPSF1Q10570 1443 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 NSD3Q9BZ95 1437 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 C4BP0C0L5 1744 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TIAM2Q8IVF5 1701 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TOGARAM1Q9Y4F4 1720 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 MAP2P11137 1827 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 FOCADQ5VW36 1801 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 UTRNP46939 3433 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 RGPD2P0DJD1 1756 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 ZNF831Q5JPB2 1677 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 KTN1Q86UP2 1357 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 ANKRD36BQ8N2N9 1353 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TRBV6-4A0A1B0GX49 114 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 FAM24AA6NFZ4 105 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 A6NIN4 97 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 PIPP12273 146 aaPredicted RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 POLR2JP52435 117 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 NPC2P61916 151 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 COL5A1-AS1Q5SY13 56 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 Q6AWC8 147 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 RPL7L1Q6DKI1 246 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 KRTAP26-1Q6PEX3 210 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 UNQ5815/PRO19632Q6UWF5 114 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 C4orf33Q8N1A6 199 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TTC9CQ8N5M4 171 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 LINC00052Q96N35 136 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 Q9H521 79 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 RPRMQ9NS64 109 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TMEM14CQ9P0S9 112 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 SCN3AQ9NY46 2000 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 AFDNP55196 1824 aaKnown RBP0.89□□□□□ -2.27
HDAC6-212ENST00000461608 C4AP0C0L4 1744 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 MON2Q7Z3U7 1717 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 NFAT5O94916 1531 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 KCPQ6ZWJ8 1503 aa0.89□□□□□ -2.27
HDAC6-212ENST00000461608 TANC2Q9HCD6 1990 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 RBBP6Q7Z6E9 1792 aaKnown RBP0.88□□□□□ -2.27
HDAC6-212ENST00000461608 ARFGEF2Q9Y6D5 1785 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 PVALEFA0A1B0GWK0 134 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 TCRBV3S1A0A5B6 114 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 RBAKDNA6NC62 111 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 DNAL4O96015 105 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
HDAC6-212ENST00000461608 UBA52P62987 128 aaKnown RBP0.88□□□□□ -2.27
HDAC6-212ENST00000461608 RHOHQ15669 191 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 SPANXN1Q5VSR9 72 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 LYPD5Q6UWN5 251 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 Q8N8P6 123 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 TMEM141Q96I45 108 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 OBSCN-AS1Q96MR7 158 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 DPH3P1Q9H4G8 78 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 MRPL36Q9P0J6 103 aaKnown RBP0.88□□□□□ -2.27
HDAC6-212ENST00000461608 NRXN2Q9P2S2 1712 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 ZFC3H1O60293 1989 aaKnown RBP0.88□□□□□ -2.27
HDAC6-212ENST00000461608 CEP350Q5VT06 3117 aa0.88□□□□□ -2.27
HDAC6-212ENST00000461608 TNRC6BQ9UPQ9 1833 aaKnown RBP0.87□□□□□ -2.27
HDAC6-212ENST00000461608 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
HDAC6-212ENST00000461608 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 TMEM30CPA0ZSE6 113 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 H3BRM9 83 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 PPYP01298 95 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 MT-ATP8P03928 68 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 GYPBP06028 91 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 COX7CP15954 63 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 SPRNQ5BIV9 151 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 C9orf116Q5BN46 136 aaPredicted RBP0.87□□□□□ -2.27
HDAC6-212ENST00000461608 LINC00322Q6ZN03 302 aaPredicted RBP0.87□□□□□ -2.27
HDAC6-212ENST00000461608 C10orf82Q8WW14 230 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 IFI27L1Q96BM0 104 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 WFDC10AQ9H1F0 79 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 PRO1933Q9H354 126 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 MRPL35Q9NZE8 188 aaKnown RBP0.87□□□□□ -2.27
HDAC6-212ENST00000461608 LINC00474Q9P2X8 69 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 CEP192Q8TEP8 1941 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 TECTAO75443 2155 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 KIAA1549Q9HCM3 1950 aa0.87□□□□□ -2.27
HDAC6-212ENST00000461608 ANKRD26Q9UPS8 1709 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 CD163L1Q9NR16 1453 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 BCORQ6W2J9 1755 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 SCN11AQ9UI33 1791 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 DLG5Q8TDM6 1919 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 CXorf51AA0A1B0GTR3 108 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 HCG22E2RYF7 251 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 GNGT2O14610 69 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 CBLN1P23435 193 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 SLC48A1Q6P1K1 146 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 SMIM5Q71RC9 77 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 C5orf38Q86SI9 138 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 C9orf62Q8N4C0 152 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 PPDPFLQ8WWR9 84 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 TSLPQ969D9 159 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 AQP10Q96PS8 301 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 VAMP8Q9BV40 100 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms