RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PRELID3AQ96N28 172 aa7.65□□□□□ -1.18
SSBP1-202ENST00000461433 C20orf78Q9BR46 151 aa7.65□□□□□ -1.18
SSBP1-202ENST00000461433 TSHBP01222 138 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 APCSP02743 223 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 PMCHP20382 165 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 RPL32P62910 135 aaKnown RBP7.64□□□□□ -1.19
SSBP1-202ENST00000461433 COTL1Q14019 142 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 LINC01556Q5JQF7 62 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 NIT1Q86X76 327 aa7.64□□□□□ -1.19
SSBP1-202ENST00000461433 TRBV25-1A0A075B6N4 114 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 IGHV1-24A0A0C4DH33 117 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 PRSS47A8MTI9 375 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 VCYO14598 125 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 MT-ND6P03923 174 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
SSBP1-202ENST00000461433 LAMTOR2Q9Y2Q5 125 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 SCO1O75880 301 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 CHCHD7Q9BUK0 85 aa7.63□□□□□ -1.19
SSBP1-202ENST00000461433 IGHV3-30P01768 117 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 IGHV3-33P01772 117 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 IGHV3-30-5P0DP03 117 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 ESDP10768 282 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 AMTP48728 403 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 CHCHD5Q9BSY4 110 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 SMIM2Q9BVW6 85 aa7.62□□□□□ -1.19
SSBP1-202ENST00000461433 COLCA2A8K830 154 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 K7EP13 123 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 FABP9Q0Z7S8 132 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 MPV17L2Q567V2 206 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 TTC32Q5I0X7 151 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 ALKBH7Q9BT30 221 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-202ENST00000461433 TMEM243Q9BU79 118 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
SSBP1-202ENST00000461433 GAGE6Q13070 117 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 Q8N976 141 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
SSBP1-202ENST00000461433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-202ENST00000461433 A0A087WX48 190 aa7.59□□□□□ -1.19
SSBP1-202ENST00000461433 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-202ENST00000461433 IBA57-AS1B1ANH7 110 aa7.59□□□□□ -1.19
SSBP1-202ENST00000461433 TCAPO15273 167 aa7.59□□□□□ -1.19
SSBP1-202ENST00000461433 RBX1P62877 108 aa7.59□□□□□ -1.19
SSBP1-202ENST00000461433 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 H7C423 109 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 FCER1GP30273 86 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 C10orf126Q8N4M7 172 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 Q8N8P6 123 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 FRAS1Q86XX4 4008 aa7.58□□□□□ -1.2
SSBP1-202ENST00000461433 RTL8CO15255 209 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 IFI27P40305 119 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-202ENST00000461433 PKIAP61925 76 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 C1orf134Q5TEV5 83 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-202ENST00000461433 C6orf223Q8N319 242 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 KLK12Q9UKR0 248 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 UBE2L6O14933 153 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
SSBP1-202ENST00000461433 RAB5AP20339 215 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 LAGE3Q14657 143 aa7.57□□□□□ -1.2
SSBP1-202ENST00000461433 DNAH2Q9P225 4427 aa7.56□□□□□ -1.2
SSBP1-202ENST00000461433 FGF6P10767 208 aa7.56□□□□□ -1.2
SSBP1-202ENST00000461433 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
SSBP1-202ENST00000461433 MRPL52Q86TS9 123 aaKnown RBP7.56□□□□□ -1.2
SSBP1-202ENST00000461433 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
SSBP1-202ENST00000461433 LINC01546A6NGU7 62 aa7.55□□□□□ -1.2
SSBP1-202ENST00000461433 ANGP03950 147 aaKnown RBP7.55□□□□□ -1.2
SSBP1-202ENST00000461433 TRGC2P03986 189 aa7.55□□□□□ -1.2
SSBP1-202ENST00000461433 C18orf32Q8TCD1 76 aa7.55□□□□□ -1.2
SSBP1-202ENST00000461433 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
SSBP1-202ENST00000461433 RPL39P62891 51 aaKnown RBP7.54□□□□□ -1.2
SSBP1-202ENST00000461433 LINC00269Q8N2A0 174 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 URB1-AS1Q96HZ7 61 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 K7EMI3 77 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
SSBP1-202ENST00000461433 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
SSBP1-202ENST00000461433 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 Q9HAA7 133 aa7.54□□□□□ -1.2
SSBP1-202ENST00000461433 TMA7Q9Y2S6 64 aaKnown RBP7.54□□□□□ -1.2
SSBP1-202ENST00000461433 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
SSBP1-202ENST00000461433 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
SSBP1-202ENST00000461433 NFE4Q86UQ8 179 aa7.53□□□□□ -1.2
SSBP1-202ENST00000461433 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
SSBP1-202ENST00000461433 DNAH10Q8IVF4 4471 aa7.53□□□□□ -1.2
SSBP1-202ENST00000461433 REG3AQ06141 175 aa7.52□□□□□ -1.21
SSBP1-202ENST00000461433 ORMDL2Q53FV1 153 aa7.52□□□□□ -1.21
SSBP1-202ENST00000461433 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
SSBP1-202ENST00000461433 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
SSBP1-202ENST00000461433 Q0VG73 95 aa7.51□□□□□ -1.21
SSBP1-202ENST00000461433 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms