RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.77
VARS-219ENST00000461328 FRZBQ92765 325 aa10.21□□□□□ -0.77
VARS-219ENST00000461328 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
VARS-219ENST00000461328 RIGQ13278 110 aa10.2□□□□□ -0.78
VARS-219ENST00000461328 WFDC2Q14508 124 aa10.2□□□□□ -0.78
VARS-219ENST00000461328 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
VARS-219ENST00000461328 XGP55808 180 aa10.19□□□□□ -0.78
VARS-219ENST00000461328 DNAH5Q8TE73 4624 aa10.19□□□□□ -0.78
VARS-219ENST00000461328 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
VARS-219ENST00000461328 ENHOQ6UWT2 76 aa10.18□□□□□ -0.78
VARS-219ENST00000461328 LINC00269Q8N2A0 174 aa10.18□□□□□ -0.78
VARS-219ENST00000461328 NUP35Q8NFH5 326 aa10.18□□□□□ -0.78
VARS-219ENST00000461328 TMEM191AQ9H0A3 160 aa10.18□□□□□ -0.78
VARS-219ENST00000461328 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
VARS-219ENST00000461328 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
VARS-219ENST00000461328 HLA-DQA1P01909 254 aa10.17□□□□□ -0.78
VARS-219ENST00000461328 MIAQ16674 131 aa10.17□□□□□ -0.78
VARS-219ENST00000461328 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
VARS-219ENST00000461328 APCSP02743 223 aa10.16□□□□□ -0.78
VARS-219ENST00000461328 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
VARS-219ENST00000461328 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
VARS-219ENST00000461328 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
VARS-219ENST00000461328 TMEM70Q9BUB7 260 aa10.15□□□□□ -0.78
VARS-219ENST00000461328 ST20Q9HBF5 79 aa10.15□□□□□ -0.78
VARS-219ENST00000461328 NCR2O95944 276 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 PMCHP20382 165 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 REG3AQ06141 175 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
VARS-219ENST00000461328 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 SMIM27A0A1W2PRY6 76 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 I3L3M4 83 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 RAB4AP20338 218 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 CAMPP49913 170 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 HAMPP81172 84 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
VARS-219ENST00000461328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
VARS-219ENST00000461328 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
VARS-219ENST00000461328 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
VARS-219ENST00000461328 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
VARS-219ENST00000461328 SMKR1H3BMG3 65 aa10.12□□□□□ -0.79
VARS-219ENST00000461328 GAS8-AS1O95177 125 aa10.12□□□□□ -0.79
VARS-219ENST00000461328 RNASEKQ6P5S7 137 aaKnown RBP10.12□□□□□ -0.79
VARS-219ENST00000461328 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
VARS-219ENST00000461328 IGKV3OR2-268A0A0C4DH90 116 aa10.11□□□□□ -0.79
VARS-219ENST00000461328 A0A1B0GW15 77 aa10.11□□□□□ -0.79
VARS-219ENST00000461328 RPS10P46783 165 aaKnown RBP10.11□□□□□ -0.79
VARS-219ENST00000461328 Q5VSD8 79 aa10.11□□□□□ -0.79
VARS-219ENST00000461328 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
VARS-219ENST00000461328 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
VARS-219ENST00000461328 PPP1R17O96001 155 aa10.1□□□□□ -0.79
VARS-219ENST00000461328 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
VARS-219ENST00000461328 S100A8P05109 93 aa10.1□□□□□ -0.79
VARS-219ENST00000461328 CLLU1Q5K131 121 aa10.1□□□□□ -0.79
VARS-219ENST00000461328 TRAV8-4A0A0B4J246 113 aa10.09□□□□□ -0.79
VARS-219ENST00000461328 PPP1R2P9O14990 202 aa10.09□□□□□ -0.79
VARS-219ENST00000461328 HBBP68871 147 aa10.09□□□□□ -0.79
VARS-219ENST00000461328 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
VARS-219ENST00000461328 FAM30AQ9NZY2 134 aa10.09□□□□□ -0.79
VARS-219ENST00000461328 F8W036 122 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 H7C423 109 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 TSHBP01222 138 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 FGF6P10767 208 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 FCER1GP30273 86 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 MRPL51Q4U2R6 128 aaKnown RBP10.08□□□□□ -0.8
VARS-219ENST00000461328 FAM104BQ5XKR9 115 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 TMEM101Q96IK0 257 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
VARS-219ENST00000461328 FAM229AH3BQW9 127 aa10.07□□□□□ -0.8
VARS-219ENST00000461328 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
VARS-219ENST00000461328 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
VARS-219ENST00000461328 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 C7orf77A4D0Y5 90 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 VCYO14598 125 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 MT-ND4LP03901 98 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
VARS-219ENST00000461328 CKS2P33552 79 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 POLR2KP53803 58 aaKnown RBP10.06□□□□□ -0.8
VARS-219ENST00000461328 NRACQ8N912 160 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
VARS-219ENST00000461328 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
VARS-219ENST00000461328 OR5A1Q8NGJ0 315 aa10.05□□□□□ -0.8
VARS-219ENST00000461328 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 LINC00862A6NCI5 91 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 IFITM2Q01629 132 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 KRTAP26-1Q6PEX3 210 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 Q6ZSA8 131 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 ANAPC16Q96DE5 110 aa10.04□□□□□ -0.8
VARS-219ENST00000461328 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
VARS-219ENST00000461328 D6R8Y8 96 aa10.03□□□□□ -0.8
VARS-219ENST00000461328 PRSS1P07477 247 aa10.03□□□□□ -0.8
VARS-219ENST00000461328 ESDP10768 282 aa10.03□□□□□ -0.8
VARS-219ENST00000461328 hDV102S1A0JD36 115 aa10.02□□□□□ -0.81
VARS-219ENST00000461328 SMAGPQ0VAQ4 97 aa10.02□□□□□ -0.81
VARS-219ENST00000461328 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
VARS-219ENST00000461328 UQCC3Q6UW78 93 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms