RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 GNG4P50150 75 aa9.35□□□□□ -0.91
SMPD4-216ENST00000461187 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
SMPD4-216ENST00000461187 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-216ENST00000461187 IFNA1P01562 189 aa9.34□□□□□ -0.91
SMPD4-216ENST00000461187 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
SMPD4-216ENST00000461187 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
SMPD4-216ENST00000461187 Q6ZRU5 148 aa9.34□□□□□ -0.91
SMPD4-216ENST00000461187 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
SMPD4-216ENST00000461187 A0A087WYN8 130 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 UBE2L6O14933 153 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 AMTP48728 403 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 COTL1Q14019 142 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 WDR73Q6P4I2 378 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 C9orf62Q8N4C0 152 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
SMPD4-216ENST00000461187 TEX46H3BTG2 121 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 PDE6DO43924 150 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 CTRLP40313 264 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 SULT1A2P50226 295 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 NUDT10Q8NFP7 164 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 MED9Q9NWA0 146 aa9.32□□□□□ -0.92
SMPD4-216ENST00000461187 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
SMPD4-216ENST00000461187 GAGE12HA6NDE8 117 aa9.3□□□□□ -0.92
SMPD4-216ENST00000461187 BCL2P10415 239 aa9.3□□□□□ -0.92
SMPD4-216ENST00000461187 TWIST1Q15672 202 aa9.3□□□□□ -0.92
SMPD4-216ENST00000461187 EIF5AL1Q6IS14 154 aaKnown RBP9.3□□□□□ -0.92
SMPD4-216ENST00000461187 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
SMPD4-216ENST00000461187 TNXBP22105 4242 aa9.29□□□□□ -0.92
SMPD4-216ENST00000461187 TRAV26-2A0A0B4J265 109 aa9.29□□□□□ -0.92
SMPD4-216ENST00000461187 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
SMPD4-216ENST00000461187 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
SMPD4-216ENST00000461187 COX6A2Q02221 97 aa9.28□□□□□ -0.92
SMPD4-216ENST00000461187 Q6ZNX1 250 aa9.28□□□□□ -0.92
SMPD4-216ENST00000461187 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
SMPD4-216ENST00000461187 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SMPD4-216ENST00000461187 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
SMPD4-216ENST00000461187 K7EN84 100 aa9.27□□□□□ -0.93
SMPD4-216ENST00000461187 PHOX2AO14813 284 aa9.27□□□□□ -0.93
SMPD4-216ENST00000461187 RPS10P46783 165 aaKnown RBP9.27□□□□□ -0.93
SMPD4-216ENST00000461187 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
SMPD4-216ENST00000461187 OCC1Q8TAD7 63 aa9.27□□□□□ -0.93
SMPD4-216ENST00000461187 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-216ENST00000461187 NCR2O95944 276 aa9.26□□□□□ -0.93
SMPD4-216ENST00000461187 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-216ENST00000461187 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
SMPD4-216ENST00000461187 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
SMPD4-216ENST00000461187 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
SMPD4-216ENST00000461187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-216ENST00000461187 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-216ENST00000461187 H7C423 109 aa9.25□□□□□ -0.93
SMPD4-216ENST00000461187 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
SMPD4-216ENST00000461187 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
SMPD4-216ENST00000461187 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-216ENST00000461187 IGKV2-24A0A0C4DH68 120 aa9.24□□□□□ -0.93
SMPD4-216ENST00000461187 APCSP02743 223 aa9.24□□□□□ -0.93
SMPD4-216ENST00000461187 FGF6P10767 208 aa9.24□□□□□ -0.93
SMPD4-216ENST00000461187 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
SMPD4-216ENST00000461187 MAJINQ3KP22 176 aa9.24□□□□□ -0.93
SMPD4-216ENST00000461187 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
SMPD4-216ENST00000461187 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
SMPD4-216ENST00000461187 FOXI1Q12951 378 aa9.23□□□□□ -0.93
SMPD4-216ENST00000461187 SLC51BQ86UW2 128 aa9.23□□□□□ -0.93
SMPD4-216ENST00000461187 FAM231BA6NCW3 169 aa9.22□□□□□ -0.93
SMPD4-216ENST00000461187 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
SMPD4-216ENST00000461187 SMIM15Q7Z3B0 74 aa9.22□□□□□ -0.93
SMPD4-216ENST00000461187 STPG4Q8N801 248 aa9.22□□□□□ -0.93
SMPD4-216ENST00000461187 OR5A1Q8NGJ0 315 aa9.22□□□□□ -0.93
SMPD4-216ENST00000461187 A0A096LNI7 61 aa9.21□□□□□ -0.94
SMPD4-216ENST00000461187 ZNF25P17030 456 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-216ENST00000461187 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
SMPD4-216ENST00000461187 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
SMPD4-216ENST00000461187 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 I3L3M4 83 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 GATCO43716 136 aaKnown RBP9.2□□□□□ -0.94
SMPD4-216ENST00000461187 PMCHP20382 165 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 LYPD6BQ8NI32 183 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 LRP2P98164 4655 aa9.2□□□□□ -0.94
SMPD4-216ENST00000461187 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 A8MWL6 223 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 ESDP10768 282 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 XCL1P47992 114 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 FAM231DQ6ZW35 169 aa9.19□□□□□ -0.94
SMPD4-216ENST00000461187 TMEM250H0YL14 139 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 CCL25O15444 150 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 TSHBP01222 138 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 BTF3L4Q96K17 158 aa9.18□□□□□ -0.94
SMPD4-216ENST00000461187 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
SMPD4-216ENST00000461187 ST20Q9HBF5 79 aa9.17□□□□□ -0.94
SMPD4-216ENST00000461187 TMEM242Q9NWH2 141 aa9.17□□□□□ -0.94
SMPD4-216ENST00000461187 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
SMPD4-216ENST00000461187 CT83Q5H943 113 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms