RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 BLCAPP62952 87 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 WFDC3Q8IUB2 231 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 G3V318 75 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 PRB4P10163 310 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-219ENST00000461159 ECSCRQ19T08 205 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 TMEM170BQ5T4T1 132 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 C16orf92Q96LL3 132 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 PRR25Q96S07 402 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 ZMAT4Q9H898 229 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
HDAC9-219ENST00000461159 ACYP1P07311 99 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 EGR2P11161 476 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-219ENST00000461159 NPC2P61916 151 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
HDAC9-219ENST00000461159 KHDC1LQ5JSQ8 128 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-219ENST00000461159 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 ATRQ13535 2644 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 C2CD3Q4AC94 2353 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-219ENST00000461159 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 IGHV7-81A0A0B4J1V7 117 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-219ENST00000461159 IGHV3-23P01764 117 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 UBE2D1P51668 147 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 HILS1P60008 231 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 UPK3BQ9BT76 320 aa6.41□□□□□ -1.38
HDAC9-219ENST00000461159 IGKV2D-26A0A0A0MRZ7 120 aa6.4□□□□□ -1.38
HDAC9-219ENST00000461159 TRAV26-2A0A0B4J265 109 aa6.4□□□□□ -1.38
HDAC9-219ENST00000461159 LINC01549A6NIU2 74 aa6.4□□□□□ -1.38
HDAC9-219ENST00000461159 FOXC2Q99958 501 aa6.4□□□□□ -1.38
HDAC9-219ENST00000461159 K7EMI3 77 aa6.4□□□□□ -1.39
HDAC9-219ENST00000461159 ATP6V0E1O15342 81 aa6.4□□□□□ -1.39
HDAC9-219ENST00000461159 DEFB121Q5J5C9 76 aa6.4□□□□□ -1.39
HDAC9-219ENST00000461159 MRPL53Q96EL3 112 aaKnown RBP6.4□□□□□ -1.39
HDAC9-219ENST00000461159 RNF185Q96GF1 192 aa6.4□□□□□ -1.39
HDAC9-219ENST00000461159 IGHV3-35A0A0C4DH35 117 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 H3BMM0 161 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 H3BT86 120 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 HERVK_113P61574 105 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 C5orf38Q86SI9 138 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 KRTAP1-1Q07627 177 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 C5orf56Q8N8D9 126 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 Q8N8P6 123 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 CYSTM1Q9H1C7 97 aa6.39□□□□□ -1.39
HDAC9-219ENST00000461159 ZNF80P51504 273 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-219ENST00000461159 Q6ZRU5 148 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 Q8TAT8 98 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 PEMTQ9UBM1 199 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 NOTCH3Q9UM47 2321 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 IGHV3OR16-8A0A075B7F1 116 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
HDAC9-219ENST00000461159 C10orf99Q6UWK7 81 aa6.37□□□□□ -1.39
HDAC9-219ENST00000461159 MOB4Q9Y3A3 225 aa6.37□□□□□ -1.39
HDAC9-219ENST00000461159 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
HDAC9-219ENST00000461159 IGLV11-55A0A075B6I3 123 aa6.37□□□□□ -1.39
HDAC9-219ENST00000461159 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
HDAC9-219ENST00000461159 A6NDX4 124 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 PLNP26678 52 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 LAGE3Q14657 143 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
HDAC9-219ENST00000461159 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 SORL1Q92673 2214 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 FSHBP01225 129 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 KLK9Q2XQG4 91 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
HDAC9-219ENST00000461159 Q9UF83 564 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 KLK9Q9UKQ9 250 aa6.36□□□□□ -1.39
HDAC9-219ENST00000461159 GAS8-AS1O95177 125 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 AGRNO00468 2067 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 TRRAPQ9Y4A5 3859 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 IGLV2-18A0A075B6J9 118 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 GATA1P15976 413 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-219ENST00000461159 KLK15Q9H2R5 256 aa6.35□□□□□ -1.39
HDAC9-219ENST00000461159 F8W735 103 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-219ENST00000461159 LY6G6DO95868 133 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 ZNF575Q86XF7 245 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 IGHV3-11P01762 117 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
HDAC9-219ENST00000461159 RPL18AQ02543 176 aaKnown RBP6.34□□□□□ -1.39
HDAC9-219ENST00000461159 C15orf32Q32M92 178 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 Q6YL49 198 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
HDAC9-219ENST00000461159 VWFP04275 2813 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms