RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 MT-ND6P03923 174 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 HTN3P15516 51 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 S100PP25815 95 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 CAMPP49913 170 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 ESRGQ1W209 222 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
PTPN12-209ENST00000460731 FAM74A4Q5TZK3 123 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 LGALS9CQ6DKI2 356 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 MRPL54Q6P161 138 aaKnown RBP3.86□□□□□ -1.79
PTPN12-209ENST00000460731 LYPD5Q6UWN5 251 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 NEGR1Q7Z3B1 354 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 DAZ4Q86SG3 579 aaKnown RBP3.86□□□□□ -1.79
PTPN12-209ENST00000460731 AMN1Q8IY45 258 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 LYSTQ99698 3801 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 DAZ3Q9NR90 486 aaKnown RBP3.86□□□□□ -1.79
PTPN12-209ENST00000460731 LAMTOR2Q9Y2Q5 125 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 ICOSQ9Y6W8 199 aa3.86□□□□□ -1.79
PTPN12-209ENST00000460731 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 TGIF2-C20orf24A0A0A6YYL0 155 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 A0A0J9YY99 117 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 LOC100131303A0A0U1RQF7 123 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 F5H697 171 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 ATP6V1G1O75348 118 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 P0DMU3 169 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 FAM231AP0DMU4 169 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 FAM231CP0DMU5 169 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 RPS10P46783 165 aaKnown RBP3.85□□□□□ -1.79
PTPN12-209ENST00000460731 SSTP61278 116 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
PTPN12-209ENST00000460731 ZFAND6Q6FIF0 208 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 ATP6V0E2Q8NHE4 81 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 GTSF1LQ9H1H1 148 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 URGCP-MRPS24S4R325 110 aa3.85□□□□□ -1.79
PTPN12-209ENST00000460731 DNAH6Q9C0G6 4158 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 IGLV2-18A0A075B6J9 118 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 TRAV26-2A0A0B4J265 109 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 LINC01546A6NGU7 62 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 K7EP13 123 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 MT3P25713 68 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 SRIP30626 198 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 ZNF56Q15929 161 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 IQCJQ1A5X6 159 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 TMEM97Q5BJF2 176 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 NTM-AS1Q6ZSK4 140 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 CBLN2Q8IUK8 224 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 ORMDL3Q8N138 153 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 ZNRF2Q8NHG8 242 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 TMEM70Q9BUB7 260 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 MRPS16Q9Y3D3 137 aaKnown RBP3.84□□□□□ -1.79
PTPN12-209ENST00000460731 LINC00588Q9Y4M8 146 aa3.84□□□□□ -1.79
PTPN12-209ENST00000460731 TRBV6-8A0A0A6YYG3 113 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 D6R8Y8 96 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 K7EMI3 77 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 VCYO14598 125 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 TNFRSF6BO95407 300 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 NCR2O95944 276 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 APCSP02743 223 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 MGPP08493 103 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 ESDP10768 282 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 BTF3P20290 206 aaKnown RBP3.83□□□□□ -1.8
PTPN12-209ENST00000460731 CKS2P33552 79 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 CCL18P55774 89 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 SUMO2P61956 95 aaKnown RBP3.83□□□□□ -1.8
PTPN12-209ENST00000460731 GAGE1Q13065 139 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 GAGE4Q13068 117 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 GAGE5Q13069 117 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 LELP1Q5T871 98 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 RPL39LQ96EH5 51 aaKnown RBP3.83□□□□□ -1.8
PTPN12-209ENST00000460731 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
PTPN12-209ENST00000460731 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
PTPN12-209ENST00000460731 LCE6AA0A183 80 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 A0A1B0GUV1 79 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 SMKR1H3BMG3 65 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 H7C423 109 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 I3L3M4 83 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 NPYP01303 97 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 DNAH10OSP0CZ25 163 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 RAB5AP20339 215 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 OR10J3Q5JRS4 329 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 Q6ZR54 194 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 PRELID3AQ96N28 172 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
PTPN12-209ENST00000460731 TCAPO15273 167 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 TRIAP1O43715 76 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 SCO1O75880 301 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 TSHBP01222 138 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 LINC01556Q5JQF7 62 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 NIT1Q86X76 327 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 Q8N8P6 123 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 PRSS3P2Q8NHM4 247 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
PTPN12-209ENST00000460731 Q9H8V8 135 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms