RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 COX8CQ7Z4L0 72 aa11.5□□□□□ -0.57
LMNB1-203ENST00000460265 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
LMNB1-203ENST00000460265 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
LMNB1-203ENST00000460265 ELANEP08246 267 aa11.49□□□□□ -0.57
LMNB1-203ENST00000460265 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
LMNB1-203ENST00000460265 RASL10AQ92737 203 aa11.49□□□□□ -0.57
LMNB1-203ENST00000460265 PRO1854Q9UHT4 67 aa11.49□□□□□ -0.57
LMNB1-203ENST00000460265 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
LMNB1-203ENST00000460265 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
LMNB1-203ENST00000460265 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
LMNB1-203ENST00000460265 CNFNQ9BYD5 112 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 XCL2Q9UBD3 114 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 K7EMT4 169 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 NRACQ8N912 160 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
LMNB1-203ENST00000460265 DCANP1Q8TF63 244 aa11.48□□□□□ -0.57
LMNB1-203ENST00000460265 IGHV3-16A0A0C4DH30 117 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 CFC1BP0CG36 223 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 CFC1P0CG37 223 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 Q6Q795 121 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 Q6YL49 198 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
LMNB1-203ENST00000460265 APCP25054 2843 aa11.46□□□□□ -0.57
LMNB1-203ENST00000460265 A0A0J9YX75 114 aa11.46□□□□□ -0.57
LMNB1-203ENST00000460265 SUMO4Q6EEV6 95 aa11.46□□□□□ -0.57
LMNB1-203ENST00000460265 SOCS3O14543 225 aa11.46□□□□□ -0.58
LMNB1-203ENST00000460265 PPP1R17O96001 155 aa11.46□□□□□ -0.58
LMNB1-203ENST00000460265 ZNF575Q86XF7 245 aa11.46□□□□□ -0.58
LMNB1-203ENST00000460265 MUC4Q99102 2169 aa11.46□□□□□ -0.58
LMNB1-203ENST00000460265 VCYO14598 125 aa11.45□□□□□ -0.58
LMNB1-203ENST00000460265 HERVK_113P61574 105 aa11.45□□□□□ -0.58
LMNB1-203ENST00000460265 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 ZNF702PQ9H963 129 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 MRPL23Q16540 153 aaKnown RBP11.44□□□□□ -0.58
LMNB1-203ENST00000460265 IGHV3-53P01767 116 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 LINC00694P0DN24 101 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 C5orf47Q569G3 176 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 DGAT2L7PQ6IED9 249 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 ODF3Q96PU9 254 aa11.44□□□□□ -0.58
LMNB1-203ENST00000460265 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
LMNB1-203ENST00000460265 K7EQG2 157 aa11.43□□□□□ -0.58
LMNB1-203ENST00000460265 NSUN5P1Q3KNT7 163 aa11.43□□□□□ -0.58
LMNB1-203ENST00000460265 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
LMNB1-203ENST00000460265 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
LMNB1-203ENST00000460265 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
LMNB1-203ENST00000460265 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 H3BMM0 161 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 STHQ8IWL8 128 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 A0A0J9YY99 117 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 P0DMU3 169 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
LMNB1-203ENST00000460265 ATXN8Q156A1 80 aa11.41□□□□□ -0.58
LMNB1-203ENST00000460265 LINC01620Q4KN68 170 aa11.41□□□□□ -0.58
LMNB1-203ENST00000460265 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
LMNB1-203ENST00000460265 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
LMNB1-203ENST00000460265 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
LMNB1-203ENST00000460265 A4D1N5 150 aa11.4□□□□□ -0.58
LMNB1-203ENST00000460265 PROK1P58294 105 aa11.4□□□□□ -0.58
LMNB1-203ENST00000460265 BAALCQ8WXS3 180 aa11.4□□□□□ -0.59
LMNB1-203ENST00000460265 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.59
LMNB1-203ENST00000460265 KLLNB2CW77 178 aa11.39□□□□□ -0.59
LMNB1-203ENST00000460265 CFHR3Q02985 330 aa11.39□□□□□ -0.59
LMNB1-203ENST00000460265 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
LMNB1-203ENST00000460265 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
LMNB1-203ENST00000460265 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
LMNB1-203ENST00000460265 PRSS2P07478 247 aa11.39□□□□□ -0.59
LMNB1-203ENST00000460265 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
LMNB1-203ENST00000460265 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
LMNB1-203ENST00000460265 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
LMNB1-203ENST00000460265 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
LMNB1-203ENST00000460265 PMVKQ15126 192 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 SPXQ9BT56 116 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 IGHV4-4A0A075B6R2 117 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 KLK9Q2XQG4 91 aa11.37□□□□□ -0.59
LMNB1-203ENST00000460265 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 IGKV3OR2-268A0A0C4DH90 116 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 LGALS9O00182 355 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 NBEAL2Q6ZNJ1 2754 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 DNAJC9-AS1A6NH13 148 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 CD28P10747 220 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
LMNB1-203ENST00000460265 Q6ZSV7 163 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 ATRQ13535 2644 aa11.36□□□□□ -0.59
LMNB1-203ENST00000460265 UNC79Q9P2D8 2635 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms