RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 SRP19P09132 144 aaKnown RBP14.07□□□□□ -0.16
CCDC78-205ENST00000460023 TSKUQ8WUA8 353 aa14.07□□□□□ -0.16
CCDC78-205ENST00000460023 A0A1B0GVG6 124 aa14.06□□□□□ -0.16
CCDC78-205ENST00000460023 NCR2O95944 276 aa14.06□□□□□ -0.16
CCDC78-205ENST00000460023 REG3AQ06141 175 aa14.06□□□□□ -0.16
CCDC78-205ENST00000460023 FAM30AQ9NZY2 134 aa14.06□□□□□ -0.16
CCDC78-205ENST00000460023 SMR3BP02814 79 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-205ENST00000460023 AMTP48728 403 aa14.05□□□□□ -0.16
CCDC78-205ENST00000460023 SMDT1Q9H4I9 107 aa14.05□□□□□ -0.16
CCDC78-205ENST00000460023 A0A1B0GUT8 65 aa14.04□□□□□ -0.16
CCDC78-205ENST00000460023 HLA-DQA1P01909 254 aa14.04□□□□□ -0.16
CCDC78-205ENST00000460023 INAFM2P0DMQ5 153 aa14.04□□□□□ -0.16
CCDC78-205ENST00000460023 DGAT2L7PQ6IED9 249 aa14.04□□□□□ -0.16
CCDC78-205ENST00000460023 CLRN3Q8NCR9 226 aa14.04□□□□□ -0.16
CCDC78-205ENST00000460023 HIGD1CA8MV81 97 aa14.03□□□□□ -0.16
CCDC78-205ENST00000460023 H7C423 109 aa14.03□□□□□ -0.16
CCDC78-205ENST00000460023 TMEM241Q24JQ0 296 aa14.03□□□□□ -0.16
CCDC78-205ENST00000460023 C20orf203Q8NBC4 194 aa14.03□□□□□ -0.16
CCDC78-205ENST00000460023 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.17
CCDC78-205ENST00000460023 USP17L23D6RBM5 183 aa14.02□□□□□ -0.17
CCDC78-205ENST00000460023 TMEM191AQ9H0A3 160 aa14.02□□□□□ -0.17
CCDC78-205ENST00000460023 PEA15Q15121 130 aa14.01□□□□□ -0.17
CCDC78-205ENST00000460023 TRBV6-5A0A0K0K1A5 114 aa14□□□□□ -0.17
CCDC78-205ENST00000460023 KRTAP26-1Q6PEX3 210 aa14□□□□□ -0.17
CCDC78-205ENST00000460023 CLPSL2Q6UWE3 100 aa14□□□□□ -0.17
CCDC78-205ENST00000460023 IGLV4-60A0A075B6I1 120 aa13.99□□□□□ -0.17
CCDC78-205ENST00000460023 SDHAF1A6NFY7 115 aa13.99□□□□□ -0.17
CCDC78-205ENST00000460023 I3L3M4 83 aa13.99□□□□□ -0.17
CCDC78-205ENST00000460023 APCSP02743 223 aa13.98□□□□□ -0.17
CCDC78-205ENST00000460023 PLA2G1BP04054 148 aaKnown RBP13.98□□□□□ -0.17
CCDC78-205ENST00000460023 HAMPP81172 84 aa13.98□□□□□ -0.17
CCDC78-205ENST00000460023 RIGQ13278 110 aa13.98□□□□□ -0.17
CCDC78-205ENST00000460023 AMMECR1LQ6DCA0 310 aa13.98□□□□□ -0.17
CCDC78-205ENST00000460023 ISOC2Q96AB3 205 aa13.98□□□□□ -0.17
CCDC78-205ENST00000460023 RPL39LQ96EH5 51 aaKnown RBP13.98□□□□□ -0.17
CCDC78-205ENST00000460023 PPP1R17O96001 155 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 PMCHP20382 165 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 MRAP2Q96G30 205 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 ST20Q9HBF5 79 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 NAT8Q9UHE5 227 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 V9GYV3 84 aa13.97□□□□□ -0.17
CCDC78-205ENST00000460023 PRSS1P07477 247 aa13.96□□□□□ -0.17
CCDC78-205ENST00000460023 LINC01620Q4KN68 170 aa13.96□□□□□ -0.17
CCDC78-205ENST00000460023 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.17
CCDC78-205ENST00000460023 IGLV10-54A0A075B6I4 117 aa13.95□□□□□ -0.18
CCDC78-205ENST00000460023 ZNF25P17030 456 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-205ENST00000460023 RPL23P62829 140 aaKnown RBP13.95□□□□□ -0.18
CCDC78-205ENST00000460023 C9orf163Q8N9P6 203 aa13.95□□□□□ -0.18
CCDC78-205ENST00000460023 RAB4AP20338 218 aa13.94□□□□□ -0.18
CCDC78-205ENST00000460023 NUP35Q8NFH5 326 aa13.94□□□□□ -0.18
CCDC78-205ENST00000460023 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
CCDC78-205ENST00000460023 FAT1Q14517 4588 aa13.93□□□□□ -0.18
CCDC78-205ENST00000460023 CFAP161Q6P656 301 aa13.93□□□□□ -0.18
CCDC78-205ENST00000460023 SCXQ7RTU7 201 aa13.93□□□□□ -0.18
CCDC78-205ENST00000460023 BTF3L4Q96K17 158 aa13.93□□□□□ -0.18
CCDC78-205ENST00000460023 ADIRFQ15847 76 aa13.92□□□□□ -0.18
CCDC78-205ENST00000460023 RNASEKQ6P5S7 137 aaKnown RBP13.92□□□□□ -0.18
CCDC78-205ENST00000460023 TMEM101Q96IK0 257 aa13.92□□□□□ -0.18
CCDC78-205ENST00000460023 AP5S1Q9NUS5 200 aa13.92□□□□□ -0.18
CCDC78-205ENST00000460023 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.91□□□□□ -0.18
CCDC78-205ENST00000460023 TRBV27A0A0K0K1C4 114 aa13.91□□□□□ -0.18
CCDC78-205ENST00000460023 A0A1B0GW15 77 aa13.91□□□□□ -0.18
CCDC78-205ENST00000460023 FGF6P10767 208 aa13.91□□□□□ -0.18
CCDC78-205ENST00000460023 POLR2KP53803 58 aaKnown RBP13.91□□□□□ -0.18
CCDC78-205ENST00000460023 CNBPP62633 177 aaKnown RBP13.91□□□□□ -0.18
CCDC78-205ENST00000460023 LINC00528Q8N1L1 170 aa13.91□□□□□ -0.18
CCDC78-205ENST00000460023 RNF185Q96GF1 192 aa13.91□□□□□ -0.18
CCDC78-205ENST00000460023 AMN1Q8IY45 258 aa13.9□□□□□ -0.18
CCDC78-205ENST00000460023 DNAH8Q96JB1 4490 aa13.9□□□□□ -0.19
CCDC78-205ENST00000460023 SRRM2Q9UQ35 2752 aaKnown RBP13.89□□□□□ -0.19
CCDC78-205ENST00000460023 SMIM27A0A1W2PRY6 76 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 hDV102S1A0JD36 115 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 C9JQL5 133 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 VCYO14598 125 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 ESDP10768 282 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 SMAGPQ0VAQ4 97 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 CIRBP-AS1Q8TBR5 109 aa13.89□□□□□ -0.19
CCDC78-205ENST00000460023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-205ENST00000460023 IGKV2-29A2NJV5 120 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-205ENST00000460023 LINC00862A6NCI5 91 aa13.88□□□□□ -0.19
CCDC78-205ENST00000460023 PPP1R2P9O14990 202 aa13.87□□□□□ -0.19
CCDC78-205ENST00000460023 S100A8P05109 93 aa13.87□□□□□ -0.19
CCDC78-205ENST00000460023 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
CCDC78-205ENST00000460023 TSHBP01222 138 aa13.86□□□□□ -0.19
CCDC78-205ENST00000460023 SRSF3P84103 164 aaKnown RBP13.86□□□□□ -0.19
CCDC78-205ENST00000460023 IGKV3OR2-268A0A0C4DH90 116 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 GAGE12HA6NDE8 117 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 GAS8-AS1O95177 125 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 RPS10P46783 165 aaKnown RBP13.85□□□□□ -0.19
CCDC78-205ENST00000460023 SUMO2P61956 95 aaKnown RBP13.85□□□□□ -0.19
CCDC78-205ENST00000460023 FAM104BQ5XKR9 115 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 SDIM1Q6ZPB5 146 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
CCDC78-205ENST00000460023 CHCHD10Q8WYQ3 142 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-205ENST00000460023 KIR2DL4Q99706 377 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 VPS13BQ7Z7G8 4022 aa13.85□□□□□ -0.19
CCDC78-205ENST00000460023 C7orf77A4D0Y5 90 aa13.84□□□□□ -0.19
CCDC78-205ENST00000460023 FCER1GP30273 86 aa13.84□□□□□ -0.19
CCDC78-205ENST00000460023 TMEM242Q9NWH2 141 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms