RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 X6R8D5 127 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.39
VPS50-207ENST00000458530 IGHV3-73A0A0B4J1V6 119 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 GAGE12BA1L429 117 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 I3L3M4 83 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 K7EQD1 137 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 GAGE7O76087 117 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 C3orf79P0CE67 100 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
VPS50-207ENST00000458530 EMP1P54849 157 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 RPL36AP83881 106 aaKnown RBP6.39□□□□□ -1.39
VPS50-207ENST00000458530 DEFB121Q5J5C9 76 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 PET117Q6UWS5 81 aa6.39□□□□□ -1.39
VPS50-207ENST00000458530 RPL36ALQ969Q0 106 aaKnown RBP6.39□□□□□ -1.39
VPS50-207ENST00000458530 LCE6AA0A183 80 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 TRBV6-4A0A1B0GX49 114 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 LINC00612Q8N6U2 182 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 PRADC1Q9BSG0 188 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 CYSLTR1Q9Y271 337 aa6.38□□□□□ -1.39
VPS50-207ENST00000458530 IGHV4-28A0A0C4DH34 117 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.37□□□□□ -1.39
VPS50-207ENST00000458530 SYS1-DBNDD2H3BUS1 97 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 SPART-AS1P0CW21 52 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 DAD1P61803 113 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 SMAGPQ0VAQ4 97 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 SPATA12Q7Z6I5 190 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 TOMM6Q96B49 74 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 ZNF479Q96JC4 524 aa6.37□□□□□ -1.39
VPS50-207ENST00000458530 TRBV7-3A0A075B6L6 115 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 A0A096LNJ9 63 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 DEFB130BP0DP73 79 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 DEFB130AP0DP74 79 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 COTL1Q14019 142 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 C2orf66Q6UXQ4 117 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 Q6ZN92 141 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 DAZ4Q86SG3 579 aaKnown RBP6.36□□□□□ -1.39
VPS50-207ENST00000458530 Q8NAQ8 132 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 SCGB3A1Q96QR1 104 aa6.36□□□□□ -1.39
VPS50-207ENST00000458530 DAZ3Q9NR90 486 aaKnown RBP6.36□□□□□ -1.39
VPS50-207ENST00000458530 HUWE1Q7Z6Z7 4374 aaKnown RBP6.36□□□□□ -1.39
VPS50-207ENST00000458530 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 TMEM97Q5BJF2 176 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 PAPPA-AS1Q5QFB9 102 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 ERASQ7Z444 233 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 C11orf68Q9H3H3 251 aaKnown RBP6.35□□□□□ -1.39
VPS50-207ENST00000458530 DKK2Q9UBU2 259 aa6.35□□□□□ -1.39
VPS50-207ENST00000458530 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 TSTD3H0UI37 97 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 H0Y8G0 127 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 TSHBP01222 138 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 ATP5G1P05496 136 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 PRSS1P07477 247 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 NPSP0C0P6 89 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 LINC01545Q5VT33 79 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 SLC25A29Q8N8R3 303 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 TMEM141Q96I45 108 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 TIMM17AQ99595 171 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 PRO0255Q9UI72 69 aa6.34□□□□□ -1.39
VPS50-207ENST00000458530 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.4
VPS50-207ENST00000458530 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 H3BS24 57 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 P0DMU3 169 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 FHL2Q14192 279 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 Q6ZSN1 163 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
VPS50-207ENST00000458530 UBE2D3P61077 147 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 PKIAP61925 76 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 UBE2D2P62837 147 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 SH2D6Q7Z4S9 175 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 HHLA3Q9XRX5 114 aa6.32□□□□□ -1.4
VPS50-207ENST00000458530 TRAV9-2A0A087WT02 112 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 GAGE12JA6NER3 117 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 PLNP26678 52 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 CRYBA4P53673 196 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 GAGE1Q13065 139 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 GAGE4Q13068 117 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 GAGE5Q13069 117 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 Q8N976 141 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 PHLDA1Q8WV24 401 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms