RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
HMGB4-202ENST00000458277 IGLV3-19P01714 112 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 CRPP02741 224 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 TRGV3P03979 118 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 LPAL2Q16609 132 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 ENHOQ6UWT2 76 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 Q6ZS52 159 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 C6orf223Q8N319 242 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 CCL4L1Q8NHW4 92 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 LINC00308Q8TCZ7 52 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 OPRPNQ99935 248 aaPredicted RBP4.06□□□□□ -1.76
HMGB4-202ENST00000458277 LINC00588Q9Y4M8 146 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 ALPK2Q86TB3 2170 aa4.06□□□□□ -1.76
HMGB4-202ENST00000458277 WDFY4Q6ZS81 3184 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 IGKV2-40A0A087WW87 121 aaPredicted RBP4.05□□□□□ -1.76
HMGB4-202ENST00000458277 IGKV3D-20A0A0C4DH25 116 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 PRYO14603 147 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 TSHBP01222 138 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 IGKV2D-40P01614 121 aaPredicted RBP4.05□□□□□ -1.76
HMGB4-202ENST00000458277 RNASE4P34096 147 aaKnown RBP4.05□□□□□ -1.76
HMGB4-202ENST00000458277 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 TMEM254Q8TBM7 123 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 DYSFO75923 2080 aa4.05□□□□□ -1.76
HMGB4-202ENST00000458277 RAI1Q7Z5J4 1906 aaPredicted RBP4.05□□□□□ -1.76
HMGB4-202ENST00000458277 ARHGEF17Q96PE2 2063 aaPredicted RBP4.04□□□□□ -1.76
HMGB4-202ENST00000458277 ZDBF2Q9HCK1 2354 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 TRBV7-4A0A0J9YYF1 115 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 I3L2K1 104 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 IGKV1-16P04430 117 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 MGPP08493 103 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 C15orf32Q32M92 178 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 GPHB5Q86YW7 130 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 Q8N6K4 173 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 LINC01560Q8TB33 94 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 RMI2Q96E14 147 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 SMAD5-AS1Q9Y6J3 95 aa4.04□□□□□ -1.76
HMGB4-202ENST00000458277 TECTAO75443 2155 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 A0A087WWL8 130 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 A0A087X002 238 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 LOC100131303A0A0U1RQF7 123 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 SPTY2D1-AS1A0A0U1RR47 76 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 hDV103S1A0JD37 113 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 C8orf87E5RJ46 101 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 K7EMT4 169 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 NDUFB1O75438 58 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 IGKV1-17P01599 117 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 RUSC1-AS1Q66K80 236 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 C20orf203Q8NBC4 194 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 DIRC1Q969H9 104 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
HMGB4-202ENST00000458277 FRYLO94915 3013 aa4.03□□□□□ -1.77
HMGB4-202ENST00000458277 SPAG17Q6Q759 2223 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 WDR87Q6ZQQ6 2873 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 CACNA1HO95180 2353 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 IGKV1D-17A0A075B6S4 117 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 B3GALT5-AS1P59052 145 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 NREPQ16612 68 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 HCP5Q6MZN7 132 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 SOSTDC1Q6X4U4 206 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
HMGB4-202ENST00000458277 C11orf45Q8TAV5 145 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
HMGB4-202ENST00000458277 TET2Q6N021 2002 aaPredicted RBP4.02□□□□□ -1.77
HMGB4-202ENST00000458277 ZNF318Q5VUA4 2279 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 VPS13AQ96RL7 3174 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 GPR179Q6PRD1 2367 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 IGLV4-3A0A075B6K6 122 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 A0A0J9YXV3 536 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 IGLV2-23P01705 113 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 C19orf54Q5BKX5 351 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 Q6ZTC4 211 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 LINC00269Q8N2A0 174 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 PATE1Q8WXA2 126 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 RPL39LQ96EH5 51 aaKnown RBP4.01□□□□□ -1.77
HMGB4-202ENST00000458277 LINC00167Q96N53 147 aa4.01□□□□□ -1.77
HMGB4-202ENST00000458277 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 BUB1B-PAK6H3BSN5 160 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 LHBP01229 141 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 CCL4P13236 92 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
HMGB4-202ENST00000458277 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 UNQ9165/PRO28630Q6UXU0 137 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 TMEM105Q8N8V8 129 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 Q8TAT8 98 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 BPESC1Q9GZL8 116 aa4□□□□□ -1.77
HMGB4-202ENST00000458277 ZNF292O60281 2723 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 A0A087WZ39 114 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 TRBV6-8A0A0A6YYG3 113 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms