RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ODF1Q14990 250 aa9.02□□□□□ -0.97
UPF3AP2-201ENST00000457924 WDR73Q6P4I2 378 aa9.02□□□□□ -0.97
UPF3AP2-201ENST00000457924 AP1S3Q96PC3 154 aa9.02□□□□□ -0.97
UPF3AP2-201ENST00000457924 KRTAP4-7Q9BYR0 210 aa9.02□□□□□ -0.97
UPF3AP2-201ENST00000457924 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
UPF3AP2-201ENST00000457924 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
UPF3AP2-201ENST00000457924 COX6A2Q02221 97 aa9.01□□□□□ -0.97
UPF3AP2-201ENST00000457924 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
UPF3AP2-201ENST00000457924 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
UPF3AP2-201ENST00000457924 ALG5Q9Y673 324 aa9.01□□□□□ -0.97
UPF3AP2-201ENST00000457924 IGLV4-60A0A075B6I1 120 aa9□□□□□ -0.97
UPF3AP2-201ENST00000457924 H7C1H1 209 aa9□□□□□ -0.97
UPF3AP2-201ENST00000457924 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
UPF3AP2-201ENST00000457924 S100A9P06702 114 aaKnown RBP9□□□□□ -0.97
UPF3AP2-201ENST00000457924 TMEM243Q9BU79 118 aa9□□□□□ -0.97
UPF3AP2-201ENST00000457924 GFRA4Q9GZZ7 299 aa9□□□□□ -0.97
UPF3AP2-201ENST00000457924 IGKV2-24A0A0C4DH68 120 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 M0QY20 66 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 MGPP08493 103 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 SULT1A2P50226 295 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 Q5BKY6 102 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 STPG4Q8N801 248 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 KRTAP9-3Q9BYQ3 159 aa8.99□□□□□ -0.97
UPF3AP2-201ENST00000457924 UBE2L6O14933 153 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 BAGE2Q86Y30 109 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 MED28Q9H204 178 aa8.98□□□□□ -0.97
UPF3AP2-201ENST00000457924 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 PAGE4O60829 102 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 GAS8-AS1O95177 125 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 NKX2-5P52952 324 aaPredicted RBP8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 KRTAP10-8P60410 259 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 MLST8Q9BVC4 326 aa8.97□□□□□ -0.97
UPF3AP2-201ENST00000457924 FXYD6-FXYD2A0A087WZ82 144 aa8.96□□□□□ -0.98
UPF3AP2-201ENST00000457924 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
UPF3AP2-201ENST00000457924 GIPP09681 153 aaPredicted RBP8.95□□□□□ -0.98
UPF3AP2-201ENST00000457924 PGLYRP4Q96LB8 373 aa8.95□□□□□ -0.98
UPF3AP2-201ENST00000457924 TPPP3Q9BW30 176 aa8.95□□□□□ -0.98
UPF3AP2-201ENST00000457924 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
UPF3AP2-201ENST00000457924 PFDN1O60925 122 aa8.94□□□□□ -0.98
UPF3AP2-201ENST00000457924 AMTP48728 403 aa8.94□□□□□ -0.98
UPF3AP2-201ENST00000457924 RASL11AQ6T310 242 aa8.94□□□□□ -0.98
UPF3AP2-201ENST00000457924 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
UPF3AP2-201ENST00000457924 A0A096LNI7 61 aa8.93□□□□□ -0.98
UPF3AP2-201ENST00000457924 KRTAP4-9Q9BYQ8 210 aa8.93□□□□□ -0.98
UPF3AP2-201ENST00000457924 NIT2Q9NQR4 276 aa8.93□□□□□ -0.98
UPF3AP2-201ENST00000457924 CACNG7P62955 275 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 COTL1Q14019 142 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
UPF3AP2-201ENST00000457924 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
UPF3AP2-201ENST00000457924 Q6ZRP5 223 aa8.91□□□□□ -0.98
UPF3AP2-201ENST00000457924 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
UPF3AP2-201ENST00000457924 A0A1B0GV50 99 aa8.9□□□□□ -0.98
UPF3AP2-201ENST00000457924 IGLC6P0CF74 106 aa8.9□□□□□ -0.98
UPF3AP2-201ENST00000457924 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
UPF3AP2-201ENST00000457924 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
UPF3AP2-201ENST00000457924 CYTL1Q9NRR1 136 aa8.9□□□□□ -0.98
UPF3AP2-201ENST00000457924 TRGC1P0CF51 173 aa8.89□□□□□ -0.99
UPF3AP2-201ENST00000457924 RPL35P42766 123 aaKnown RBP8.89□□□□□ -0.99
UPF3AP2-201ENST00000457924 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
UPF3AP2-201ENST00000457924 OR2D3Q8NGH3 330 aa8.89□□□□□ -0.99
UPF3AP2-201ENST00000457924 MBD3L1Q8WWY6 194 aa8.89□□□□□ -0.99
UPF3AP2-201ENST00000457924 KRTAP23-1A1A580 65 aa8.88□□□□□ -0.99
UPF3AP2-201ENST00000457924 F2Z2F3 143 aa8.88□□□□□ -0.99
UPF3AP2-201ENST00000457924 KCNRGQ8N5I3 272 aa8.88□□□□□ -0.99
UPF3AP2-201ENST00000457924 FAM213BQ8TBF2 198 aa8.88□□□□□ -0.99
UPF3AP2-201ENST00000457924 XKRY2A2RUG3 117 aa8.87□□□□□ -0.99
UPF3AP2-201ENST00000457924 ARPC5O15511 151 aa8.87□□□□□ -0.99
UPF3AP2-201ENST00000457924 RNASEKQ6P5S7 137 aaKnown RBP8.87□□□□□ -0.99
UPF3AP2-201ENST00000457924 FOXI1Q12951 378 aa8.86□□□□□ -0.99
UPF3AP2-201ENST00000457924 LCE5AQ5TCM9 118 aa8.86□□□□□ -0.99
UPF3AP2-201ENST00000457924 FAM231BA6NCW3 169 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 UMAD1C9J7I0 102 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 H7C423 109 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 NTF3P20783 257 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 CENPWQ5EE01 88 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
UPF3AP2-201ENST00000457924 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 NCR2O95944 276 aa8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 IFNA1P01562 189 aa8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 Q6ZNX1 250 aa8.84□□□□□ -0.99
UPF3AP2-201ENST00000457924 G3V3Q6 166 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 APCSP02743 223 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 FGF6P10767 208 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 XCL1P47992 114 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 C11orf52Q96A22 123 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms