RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
LSS-205ENST00000457828 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 K7EMT4 169 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 GAGE7O76087 117 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 SETXQ7Z333 2677 aaKnown RBP12.25□□□□□ -0.45
LSS-205ENST00000457828 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
LSS-205ENST00000457828 FLNAP21333 2647 aaKnown RBP12.24□□□□□ -0.45
LSS-205ENST00000457828 RPL36AP83881 106 aaKnown RBP12.24□□□□□ -0.45
LSS-205ENST00000457828 RPL36ALQ969Q0 106 aaKnown RBP12.24□□□□□ -0.45
LSS-205ENST00000457828 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
LSS-205ENST00000457828 ZMAT4Q9H898 229 aa12.24□□□□□ -0.45
LSS-205ENST00000457828 Q8N1Y9 231 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 B5MCH6 92 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 TEP1Q99973 2627 aaKnown RBP12.23□□□□□ -0.45
LSS-205ENST00000457828 CRLF1O75462 422 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 Q8N6K4 173 aa12.23□□□□□ -0.45
LSS-205ENST00000457828 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
LSS-205ENST00000457828 CRYBA4P53673 196 aa12.22□□□□□ -0.45
LSS-205ENST00000457828 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
LSS-205ENST00000457828 A0A0J9YY99 117 aa12.21□□□□□ -0.45
LSS-205ENST00000457828 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.45
LSS-205ENST00000457828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.21□□□□□ -0.45
LSS-205ENST00000457828 IGKV2-29A2NJV5 120 aaPredicted RBP12.21□□□□□ -0.45
LSS-205ENST00000457828 LEPROTO15243 131 aa12.21□□□□□ -0.45
LSS-205ENST00000457828 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
LSS-205ENST00000457828 TIMM17AQ99595 171 aa12.21□□□□□ -0.45
LSS-205ENST00000457828 SS18L2Q9UHA2 77 aa12.21□□□□□ -0.46
LSS-205ENST00000457828 IGSF10Q6WRI0 2623 aa12.21□□□□□ -0.46
LSS-205ENST00000457828 RHOHQ15669 191 aa12.2□□□□□ -0.46
LSS-205ENST00000457828 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
LSS-205ENST00000457828 Q6ZUT4 128 aa12.2□□□□□ -0.46
LSS-205ENST00000457828 DAND5Q8N907 189 aa12.2□□□□□ -0.46
LSS-205ENST00000457828 CARD19Q96LW7 228 aa12.2□□□□□ -0.46
LSS-205ENST00000457828 CEMP1Q6PRD7 247 aaPredicted RBP12.2□□□□□ -0.46
LSS-205ENST00000457828 MAP1AP78559 2803 aaPredicted RBP12.19□□□□□ -0.46
LSS-205ENST00000457828 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
LSS-205ENST00000457828 MORN3Q6PF18 240 aaPredicted RBP12.19□□□□□ -0.46
LSS-205ENST00000457828 COX8CQ7Z4L0 72 aa12.18□□□□□ -0.46
LSS-205ENST00000457828 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
LSS-205ENST00000457828 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
LSS-205ENST00000457828 MED14OSP0DP75 135 aa12.17□□□□□ -0.46
LSS-205ENST00000457828 IFITM1P13164 125 aa12.17□□□□□ -0.46
LSS-205ENST00000457828 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 ATP6V0E2Q8NHE4 81 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 PSMB8P28062 276 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 RHODO00212 210 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 P0DMU3 169 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
LSS-205ENST00000457828 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
LSS-205ENST00000457828 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 GAGE4Q13068 117 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 GAGE5Q13069 117 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 DEFB135Q30KP9 77 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 RNF183Q96D59 192 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 CRPP02741 224 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 LINC00158P58513 81 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 C20orf203Q8NBC4 194 aa12.15□□□□□ -0.46
LSS-205ENST00000457828 BOD1L1Q8NFC6 3051 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
LSS-205ENST00000457828 IGHV4-4A0A075B6R2 117 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 GAGE6Q13070 117 aa12.14□□□□□ -0.47
LSS-205ENST00000457828 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
LSS-205ENST00000457828 XGP55808 180 aa12.13□□□□□ -0.47
LSS-205ENST00000457828 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
LSS-205ENST00000457828 DEFB114Q30KQ6 69 aa12.12□□□□□ -0.47
LSS-205ENST00000457828 Q9H8V8 135 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 A0A096LPF7 62 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 DEFB4AO15263 64 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 U3KQE9 123 aa12.11□□□□□ -0.47
LSS-205ENST00000457828 PSCAO43653 123 aa12.1□□□□□ -0.47
LSS-205ENST00000457828 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
LSS-205ENST00000457828 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
LSS-205ENST00000457828 A0A0J9YX75 114 aa12.1□□□□□ -0.47
LSS-205ENST00000457828 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
LSS-205ENST00000457828 A0A0J9YXY3 114 aa12.09□□□□□ -0.47
LSS-205ENST00000457828 PAX4O43316 350 aa12.09□□□□□ -0.47
LSS-205ENST00000457828 MALP21145 153 aa12.09□□□□□ -0.47
LSS-205ENST00000457828 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
LSS-205ENST00000457828 LGALS9O00182 355 aa12.09□□□□□ -0.47
LSS-205ENST00000457828 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
LSS-205ENST00000457828 IGHV3-33P01772 117 aa12.08□□□□□ -0.48
LSS-205ENST00000457828 EDN2P20800 178 aa12.08□□□□□ -0.48
LSS-205ENST00000457828 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
LSS-205ENST00000457828 A8MZ25 164 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms