RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 ZNF609O15014 1411 aa2.07□□□□□ -2.08
RFX3-AS1-203ENST00000457566 VPS8Q8N3P4 1428 aa2.07□□□□□ -2.08
RFX3-AS1-203ENST00000457566 LRBAP50851 2863 aa2.07□□□□□ -2.08
RFX3-AS1-203ENST00000457566 HELZP42694 1942 aaKnown RBP2.07□□□□□ -2.08
RFX3-AS1-203ENST00000457566 IQGAP2Q13576 1575 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ALS2Q96Q42 1657 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 XRN1Q8IZH2 1706 aaKnown RBP2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 LAMA5O15230 3695 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 MGAM2Q2M2H8 2515 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 LOC100130705A0A1B0GUX0 176 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 J3QLW9 94 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PITX3O75364 302 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 IGHV3-33P01772 117 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 AKAIN1P0CW23 69 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 GNG4P50150 75 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 MIR22HGQ0VDD5 57 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PATE1Q8WXA2 126 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TAS2R8Q9NYW2 309 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PRO0461Q9UI25 63 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 BOKQ9UMX3 212 aaPredicted RBP2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 FYCO1Q9BQS8 1478 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TRPM2O94759 1503 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 CSPG4Q6UVK1 2322 aa2.06□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PLXNA1Q9UIW2 1896 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 NBASA2RRP1 2371 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 CD2P06729 351 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 RNASE3P12724 160 aaKnown RBP2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 COX7CP15954 63 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 HIST1H1DP16402 221 aaKnown RBP2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ZCCHC23Q6ZST2 131 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 SNX29P2Q8IUI4 249 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 VSTM2AQ8TAG5 236 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PPP3R2Q96LZ3 170 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 LINC00052Q96N35 136 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 NAA60Q9H7X0 242 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ORMDL1Q9P0S3 153 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 NOP16Q9Y3C1 178 aaKnown RBP2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 HIVEP1P15822 2718 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 NIPBLQ6KC79 2804 aaeCLIP2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ADGRG4Q8IZF6 3080 aa2.05□□□□□ -2.08
RFX3-AS1-203ENST00000457566 C20orf202A1L168 122 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 COL6A6A6NMZ7 2263 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 M0R129 80 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 CCL16O15467 120 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TNFP01375 233 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ADCYAP1P18509 176 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 RBP2P50120 134 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 INO80Q9ULG1 1556 aaPredicted RBP2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ZFP30Q9Y2G7 519 aa2.04□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ICE1Q9Y2F5 2266 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 BSNQ9UPA5 3926 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PLXNC1O60486 1568 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 PRRC2CQ9Y520 2896 aaKnown RBP2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 LOC107984156A0A0G2JMH3 177 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 SLC25A26Q70HW3 274 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 COA5Q86WW8 74 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 GKN2Q86XP6 184 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 ARL17AQ8IVW1 177 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TMEM106BQ9NUM4 274 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 COA4Q9NYJ1 87 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 IER3IP1Q9Y5U9 82 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 OTOGQ6ZRI0 2925 aa2.03□□□□□ -2.08
RFX3-AS1-203ENST00000457566 TSC2P49815 1807 aa2.03□□□□□ -2.09
RFX3-AS1-203ENST00000457566 WNK1Q9H4A3 2382 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 SPAARA0A1B0GVQ0 90 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 MIC13Q5XKP0 118 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 DYNLRB2Q8TF09 96 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 AHCTF1Q8WYP5 2266 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 CUBNO60494 3623 aa2.02□□□□□ -2.09
RFX3-AS1-203ENST00000457566 ARHGAP5Q13017 1502 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 F8W1H4 67 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 CCDC179H3BU77 68 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 S100A8P05109 93 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 IGKV4-1P06312 121 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 PPP3R1P63098 170 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 FAM74A1Q5RGS3 127 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 TEX261Q6UWH6 196 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 RPRMQ9NS64 109 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 SERP1Q9Y6X1 66 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 PIK3C2BO00750 1634 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 ATMQ13315 3056 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 HERC2O95714 4834 aa2.01□□□□□ -2.09
RFX3-AS1-203ENST00000457566 AKAP13Q12802 2813 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 IFT172Q9UG01 1749 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 C5P01031 1676 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 LMO7Q8WWI1 1683 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 PTPRFP10586 1907 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 TRBV6-4A0A1B0GX49 114 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 J3QRE1 110 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 NUPR1O60356 82 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 TPPP2P59282 170 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 Q56UQ5 140 aa2□□□□□ -2.09
RFX3-AS1-203ENST00000457566 Q6AWC8 147 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms