RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 Q6ZSV7 163 aa9.14□□□□□ -0.95
LINC00959-201ENST00000456581 SMR3AQ99954 134 aa9.14□□□□□ -0.95
LINC00959-201ENST00000456581 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 A0A1W2PRX2 142 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 J3QR89 54 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 CKS1BP61024 79 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
LINC00959-201ENST00000456581 AMELXQ99217 191 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 VWFP04275 2813 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 A8MZ25 164 aa9.13□□□□□ -0.95
LINC00959-201ENST00000456581 SNRPD3P62318 126 aaKnown RBP9.13□□□□□ -0.95
LINC00959-201ENST00000456581 NXPH4O95158 308 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 IGHV3-16A0A0C4DH30 117 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 K7EQG2 157 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 VCYO14598 125 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 Q8N2B8 174 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
LINC00959-201ENST00000456581 TRAV2A0A0B4J234 112 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 J3QQQ9 107 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 UBE2D3P61077 147 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 UBE2D2P62837 147 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 ZNF876PQ49A33 203 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 HIVEP1P15822 2718 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
LINC00959-201ENST00000456581 LINC01619G3V211 115 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 M0QY20 66 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
LINC00959-201ENST00000456581 NPC2P61916 151 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 A0A0J9YX75 114 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 A4D1N5 150 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 A6NJY4 79 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
LINC00959-201ENST00000456581 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 HERVK_113P61574 105 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 RBMY1FQ15415 496 aaKnown RBP9.1□□□□□ -0.95
LINC00959-201ENST00000456581 TENM1Q9UKZ4 2725 aa9.1□□□□□ -0.95
LINC00959-201ENST00000456581 LGALS9O00182 355 aa9.09□□□□□ -0.95
LINC00959-201ENST00000456581 ANKRD29Q8N6D5 301 aa9.09□□□□□ -0.95
LINC00959-201ENST00000456581 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
LINC00959-201ENST00000456581 TRBV27A0A0K0K1C4 114 aa9.09□□□□□ -0.95
LINC00959-201ENST00000456581 LGALS3P17931 250 aaKnown RBP9.09□□□□□ -0.95
LINC00959-201ENST00000456581 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.95
LINC00959-201ENST00000456581 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.96
LINC00959-201ENST00000456581 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.96
LINC00959-201ENST00000456581 Q6ZUT4 128 aa9.09□□□□□ -0.96
LINC00959-201ENST00000456581 SPXQ9BT56 116 aa9.09□□□□□ -0.96
LINC00959-201ENST00000456581 PPP1R17O96001 155 aa9.08□□□□□ -0.96
LINC00959-201ENST00000456581 DEFB131AP59861 70 aa9.08□□□□□ -0.96
LINC00959-201ENST00000456581 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
LINC00959-201ENST00000456581 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
LINC00959-201ENST00000456581 TIMM17AQ99595 171 aa9.08□□□□□ -0.96
LINC00959-201ENST00000456581 CD28P10747 220 aa9.07□□□□□ -0.96
LINC00959-201ENST00000456581 CRYBA4P53673 196 aa9.07□□□□□ -0.96
LINC00959-201ENST00000456581 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
LINC00959-201ENST00000456581 GEMIN7Q9H840 131 aaKnown RBP9.07□□□□□ -0.96
LINC00959-201ENST00000456581 ATRQ13535 2644 aa9.07□□□□□ -0.96
LINC00959-201ENST00000456581 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
LINC00959-201ENST00000456581 C9JAW5 83 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 RNF183Q96D59 192 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 TMEM141Q96I45 108 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
LINC00959-201ENST00000456581 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 CRLF1O75462 422 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 IGHV3-38A0A0C4DH36 116 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 RHODO00212 210 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 Q6ZSN1 163 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
LINC00959-201ENST00000456581 TEN1Q86WV5 123 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 CITED2Q99967 270 aaPredicted RBP9.04□□□□□ -0.96
LINC00959-201ENST00000456581 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
LINC00959-201ENST00000456581 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
LINC00959-201ENST00000456581 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
LINC00959-201ENST00000456581 Q1RN00 199 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 DAND5Q8N907 189 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 PRSS2P07478 247 aa9.04□□□□□ -0.96
LINC00959-201ENST00000456581 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 PAPPA-AS1Q5QFB9 102 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
LINC00959-201ENST00000456581 VCX2Q9H322 139 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 TRBV6-5A0A0K0K1A5 114 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 TEX49A0A1B0GTD5 131 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 RPL32P62910 135 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms