RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MOB4Q9Y3A3 225 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 A0A1W2PPR1 153 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 PF4V1P10720 104 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 BRD3OSQ6XYD6 125 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 SORL1Q92673 2214 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 LY6EQ16553 131 aa7.56□□□□□ -1.2
CLIP4-208ENST00000456385 SPINK13Q1W4C9 94 aa7.56□□□□□ -1.2
CLIP4-208ENST00000456385 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
CLIP4-208ENST00000456385 DAZ1Q9NQZ3 744 aaKnown RBP7.56□□□□□ -1.2
CLIP4-208ENST00000456385 CITED2Q99967 270 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-208ENST00000456385 SPANXA1Q9NS26 97 aa7.56□□□□□ -1.2
CLIP4-208ENST00000456385 IGHG2P01859 326 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 HTN1P15515 57 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 A0A0U1RRA0 63 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 BLCAPP62952 87 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 FBXL19-AS1Q494R0 122 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 BPESC1Q9GZL8 116 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
CLIP4-208ENST00000456385 IGHV1OR15-1A0A075B7D0 117 aa7.54□□□□□ -1.2
CLIP4-208ENST00000456385 PRM2P04554 102 aa7.54□□□□□ -1.2
CLIP4-208ENST00000456385 ID1P41134 155 aa7.54□□□□□ -1.2
CLIP4-208ENST00000456385 LMO4P61968 165 aa7.54□□□□□ -1.2
CLIP4-208ENST00000456385 ATRXP46100 2492 aa7.54□□□□□ -1.2
CLIP4-208ENST00000456385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-208ENST00000456385 IGKV2-29A2NJV5 120 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-208ENST00000456385 ZNF625Q96I27 306 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-208ENST00000456385 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
CLIP4-208ENST00000456385 Q8N2B8 174 aa7.53□□□□□ -1.2
CLIP4-208ENST00000456385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-208ENST00000456385 USMG5Q96IX5 58 aa7.53□□□□□ -1.2
CLIP4-208ENST00000456385 DOPEY2Q9Y3R5 2298 aa7.53□□□□□ -1.2
CLIP4-208ENST00000456385 LOC107984640A0A0U1RRK4 108 aa7.52□□□□□ -1.2
CLIP4-208ENST00000456385 TINCRA0A1B0GVN0 87 aa7.52□□□□□ -1.2
CLIP4-208ENST00000456385 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.2
CLIP4-208ENST00000456385 CDKN2A-AS1Q9UH64 79 aa7.52□□□□□ -1.2
CLIP4-208ENST00000456385 KLK5Q9Y337 293 aaPredicted RBP7.52□□□□□ -1.2
CLIP4-208ENST00000456385 ADORA2A-AS1P86434 159 aa7.52□□□□□ -1.21
CLIP4-208ENST00000456385 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
CLIP4-208ENST00000456385 Q6ZSN1 163 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
CLIP4-208ENST00000456385 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
CLIP4-208ENST00000456385 YAE1D1Q9NRH1 226 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 CELSR2Q9HCU4 2923 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 C3orf22Q8N5N4 141 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 IMUPQ9GZP8 106 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 PTPRQQ9UMZ3 2332 aa7.51□□□□□ -1.21
CLIP4-208ENST00000456385 NDUFA7O95182 113 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 ACYP1P07311 99 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
CLIP4-208ENST00000456385 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
CLIP4-208ENST00000456385 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 LINC00467Q9BRT7 94 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 ABCA2Q9BZC7 2435 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 CREBBPQ92793 2442 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 COX6A2Q02221 97 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
CLIP4-208ENST00000456385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLIP4-208ENST00000456385 H3BUX3 64 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 COX7A2LO14548 114 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 HERVK_113P63121 156 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 SOSTDC1Q6X4U4 206 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 LINC00643Q86TS7 51 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 Q9H8V8 135 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 TIMM17BO60830 172 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 IGHV4-38-2P0DP08 117 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 SNRPD3P62318 126 aaKnown RBP7.49□□□□□ -1.21
CLIP4-208ENST00000456385 FAM218AQ96MZ4 157 aa7.49□□□□□ -1.21
CLIP4-208ENST00000456385 UQCRQO14949 82 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 NDUFA1O15239 70 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 IGLV1-40P01703 118 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 BAALC-AS2P0C853 105 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
CLIP4-208ENST00000456385 TIRAPP58753 221 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 NRGNQ92686 78 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 H3BUA1 57 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 K7EMT4 169 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 CIRBPQ14011 172 aaKnown RBP7.47□□□□□ -1.21
CLIP4-208ENST00000456385 LY6DQ14210 128 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 DNAJC30Q96LL9 226 aa7.47□□□□□ -1.21
CLIP4-208ENST00000456385 K7EQG2 157 aa7.46□□□□□ -1.21
CLIP4-208ENST00000456385 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.21
CLIP4-208ENST00000456385 Q9HAA7 133 aa7.46□□□□□ -1.21
CLIP4-208ENST00000456385 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.21
CLIP4-208ENST00000456385 RS1O15537 224 aa7.46□□□□□ -1.22
CLIP4-208ENST00000456385 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
CLIP4-208ENST00000456385 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
CLIP4-208ENST00000456385 HOXD3P31249 432 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-208ENST00000456385 CYSTM1Q9H1C7 97 aa7.45□□□□□ -1.22
CLIP4-208ENST00000456385 EDA2RQ9HAV5 297 aa7.45□□□□□ -1.22
CLIP4-208ENST00000456385 NACAE9PAV3 2078 aa7.45□□□□□ -1.22
CLIP4-208ENST00000456385 IGHV3OR16-12A0A075B7B8 117 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 A6NDX4 124 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms