RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 REG3AQ06141 175 aa11.68□□□□□ -0.54
MSH6-207ENST00000456246 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
MSH6-207ENST00000456246 ZNF727A8MUV8 499 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 NCR2O95944 276 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 CLPSL2Q6UWE3 100 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 LINC01551Q86U37 167 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 GFRA4Q9GZZ7 299 aa11.67□□□□□ -0.54
MSH6-207ENST00000456246 FAM231BA6NCW3 169 aa11.66□□□□□ -0.54
MSH6-207ENST00000456246 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
MSH6-207ENST00000456246 DGAT2L7PQ6IED9 249 aa11.65□□□□□ -0.54
MSH6-207ENST00000456246 TSKUQ8WUA8 353 aa11.65□□□□□ -0.54
MSH6-207ENST00000456246 OSTCQ9NRP0 149 aa11.65□□□□□ -0.54
MSH6-207ENST00000456246 TRAV26-2A0A0B4J265 109 aa11.64□□□□□ -0.55
MSH6-207ENST00000456246 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
MSH6-207ENST00000456246 SRP19P09132 144 aaKnown RBP11.64□□□□□ -0.55
MSH6-207ENST00000456246 LINC01620Q4KN68 170 aa11.64□□□□□ -0.55
MSH6-207ENST00000456246 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
MSH6-207ENST00000456246 CLRN3Q8NCR9 226 aa11.64□□□□□ -0.55
MSH6-207ENST00000456246 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
MSH6-207ENST00000456246 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
MSH6-207ENST00000456246 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
MSH6-207ENST00000456246 A0A1B0GUT8 65 aa11.63□□□□□ -0.55
MSH6-207ENST00000456246 H7C423 109 aa11.63□□□□□ -0.55
MSH6-207ENST00000456246 FAM74A3Q4VXF1 159 aa11.63□□□□□ -0.55
MSH6-207ENST00000456246 DMBT1Q9UGM3 2413 aaPredicted RBP11.62□□□□□ -0.55
MSH6-207ENST00000456246 A0A1B0GVG6 124 aa11.62□□□□□ -0.55
MSH6-207ENST00000456246 HIGD1CA8MV81 97 aa11.62□□□□□ -0.55
MSH6-207ENST00000456246 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
MSH6-207ENST00000456246 DNAH8Q96JB1 4490 aa11.62□□□□□ -0.55
MSH6-207ENST00000456246 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
MSH6-207ENST00000456246 SDHAF1A6NFY7 115 aa11.61□□□□□ -0.55
MSH6-207ENST00000456246 APCSP02743 223 aa11.61□□□□□ -0.55
MSH6-207ENST00000456246 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
MSH6-207ENST00000456246 RPL39LQ96EH5 51 aaKnown RBP11.61□□□□□ -0.55
MSH6-207ENST00000456246 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
MSH6-207ENST00000456246 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
MSH6-207ENST00000456246 PRSS1P07477 247 aa11.6□□□□□ -0.55
MSH6-207ENST00000456246 AMMECR1LQ6DCA0 310 aa11.6□□□□□ -0.55
MSH6-207ENST00000456246 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
MSH6-207ENST00000456246 I3L3M4 83 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 TMEM241Q24JQ0 296 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 C9orf163Q8N9P6 203 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 VPS13BQ7Z7G8 4022 aa11.59□□□□□ -0.55
MSH6-207ENST00000456246 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
MSH6-207ENST00000456246 PMCHP20382 165 aa11.58□□□□□ -0.56
MSH6-207ENST00000456246 RIGQ13278 110 aa11.58□□□□□ -0.56
MSH6-207ENST00000456246 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
MSH6-207ENST00000456246 V9GYV3 84 aa11.58□□□□□ -0.56
MSH6-207ENST00000456246 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
MSH6-207ENST00000456246 PEA15Q15121 130 aa11.57□□□□□ -0.56
MSH6-207ENST00000456246 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
MSH6-207ENST00000456246 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
MSH6-207ENST00000456246 AP5S1Q9NUS5 200 aa11.57□□□□□ -0.56
MSH6-207ENST00000456246 PPP1R17O96001 155 aa11.56□□□□□ -0.56
MSH6-207ENST00000456246 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
MSH6-207ENST00000456246 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
MSH6-207ENST00000456246 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
MSH6-207ENST00000456246 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
MSH6-207ENST00000456246 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
MSH6-207ENST00000456246 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
MSH6-207ENST00000456246 FGF6P10767 208 aa11.55□□□□□ -0.56
MSH6-207ENST00000456246 RPL23P62829 140 aaKnown RBP11.55□□□□□ -0.56
MSH6-207ENST00000456246 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
MSH6-207ENST00000456246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
MSH6-207ENST00000456246 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
MSH6-207ENST00000456246 RAB4AP20338 218 aa11.54□□□□□ -0.56
MSH6-207ENST00000456246 ADIRFQ15847 76 aa11.54□□□□□ -0.56
MSH6-207ENST00000456246 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
MSH6-207ENST00000456246 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
MSH6-207ENST00000456246 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
MSH6-207ENST00000456246 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
MSH6-207ENST00000456246 AMN1Q8IY45 258 aa11.53□□□□□ -0.56
MSH6-207ENST00000456246 ESDP10768 282 aa11.52□□□□□ -0.57
MSH6-207ENST00000456246 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.57
MSH6-207ENST00000456246 MYCBP2O75592 4640 aa11.52□□□□□ -0.57
MSH6-207ENST00000456246 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 A0A1B0GW15 77 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 TSHBP01222 138 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
MSH6-207ENST00000456246 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 C9JQL5 133 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 GAS8-AS1O95177 125 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 RPS10P46783 165 aaKnown RBP11.5□□□□□ -0.57
MSH6-207ENST00000456246 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
MSH6-207ENST00000456246 MRPL52Q86TS9 123 aaKnown RBP11.5□□□□□ -0.57
MSH6-207ENST00000456246 CHCHD10Q8WYQ3 142 aaPredicted RBP11.5□□□□□ -0.57
MSH6-207ENST00000456246 VCYO14598 125 aa11.49□□□□□ -0.57
MSH6-207ENST00000456246 LINC00862A6NCI5 91 aa11.48□□□□□ -0.57
MSH6-207ENST00000456246 S100A8P05109 93 aa11.48□□□□□ -0.57
MSH6-207ENST00000456246 FCER1GP30273 86 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms