RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HIGD2AQ9BW72 106 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 CXCL6P80162 114 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 IGHV3-49A0A0A0MS15 119 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 DIAPH2-AS1Q14236 149 aa4.03□□□□□ -1.76
CSMD3-204ENST00000455883 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
CSMD3-204ENST00000455883 UBE2D1P51668 147 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 NEXN-AS1Q8NBZ9 246 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 RNF144BQ7Z419 303 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-35A0A0C4DH35 117 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3OR16-10A0A075B7F0 116 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 I3L2K1 104 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 WISP1O95388 367 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 ESM1Q9NQ30 184 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 WI2-2373I1.2A0A1W2PRP0 233 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 TRAV23DV6A0A075B6W5 121 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 EFNA2O43921 213 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 LOXP28300 417 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-204ENST00000455883 RBX1P62877 108 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 U3KQE9 123 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 DEFB131AP59861 70 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 C4orf3Q8WVX3 66 aa4.02□□□□□ -1.77
CSMD3-204ENST00000455883 AGPAT4-IT1Q9H0P7 198 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 COL4A5P29400 1685 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 FAM120AOSQ5T036 256 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 LECT2O14960 151 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 A6NED7 52 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 SPINK13Q1W4C9 94 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-53P01767 116 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 Q8N9L7 120 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-66A0A0C4DH42 116 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-204ENST00000455883 DKK4Q9UBT3 224 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 SPAARA0A1B0GVQ0 90 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 IGFL2Q6UWQ7 119 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 DKK1O94907 266 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 RPL28P46779 137 aaKnown RBP4.01□□□□□ -1.77
CSMD3-204ENST00000455883 C8orf49Q96NF6 230 aa4.01□□□□□ -1.77
CSMD3-204ENST00000455883 UBE2D3P61077 147 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 CTSGP08311 255 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 DEFB130BP0DP73 79 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 DEFB130AP0DP74 79 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 HOXB4P17483 251 aaPredicted RBP4□□□□□ -1.77
CSMD3-204ENST00000455883 IGFBP6P24592 240 aaPredicted RBP4□□□□□ -1.77
CSMD3-204ENST00000455883 MBD6Q96DN6 1003 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 C11orf1Q9H5F2 150 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 KLK9Q9UKQ9 250 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 A0A0G2JRQ6 117 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 TRBV6-4A0A1B0GX49 114 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 hDV103S1A0JD37 113 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 IGKV1-39P01597 117 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 IGKV1D-39P04432 117 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 ZNF80P51504 273 aaPredicted RBP4□□□□□ -1.77
CSMD3-204ENST00000455883 TRBV7-7A0A0K0K1E9 115 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 A0A0U1RRA0 63 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 SMKR1H3BMG3 65 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 IGF1P05019 195 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 TRBV7-6A0A0J9YX20 115 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 IGLC6P0CF74 106 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 CENPFP49454 3210 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
CSMD3-204ENST00000455883 COL9A2Q14055 689 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-204ENST00000455883 WFDC2Q14508 124 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 LINC01560Q8TB33 94 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-33P01772 117 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 HHLA3Q9XRX5 114 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 KLK5Q9Y337 293 aaPredicted RBP3.99□□□□□ -1.77
CSMD3-204ENST00000455883 IGSF10Q6WRI0 2623 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 C5orf38Q86SI9 138 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 HTN3P15516 51 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 CFHR3Q02985 330 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 TPSG1Q9NRR2 321 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 ERC2-IT1O76042 136 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 C10orf55Q5SWW7 151 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 C17orf77Q96MU5 243 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 A0A0J9YY99 117 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 ASPHD1Q5U4P2 390 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 XCL1P47992 114 aa3.99□□□□□ -1.77
CSMD3-204ENST00000455883 RS1O15537 224 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 MIFP14174 115 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 MYCNOSP40205 109 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 DAZAP2Q15038 168 aaPredicted RBP3.98□□□□□ -1.77
CSMD3-204ENST00000455883 TRAV26-2A0A0B4J265 109 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 IGLV1-47P01700 117 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 ZFAND2AQ8N6M9 145 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 Q8IZM0 81 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 LINC00308Q8TCZ7 52 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-23P01764 117 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-30P01768 117 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV3-30-5P0DP03 117 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 EPOPA6NHQ4 379 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms