RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ENHOQ6UWT2 76 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 Q8N814 137 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 Q8N976 141 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
USP39-208ENST00000455732 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
USP39-208ENST00000455732 NCR2O95944 276 aa11.48□□□□□ -0.57
USP39-208ENST00000455732 RAB4AP20338 218 aa11.48□□□□□ -0.57
USP39-208ENST00000455732 PNRC1Q12796 327 aaPredicted RBP11.48□□□□□ -0.57
USP39-208ENST00000455732 A0A1B0GUV1 79 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 A0A1B0GW15 77 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 AMTP48728 403 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 WFDC2Q14508 124 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 MIAQ16674 131 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 AMN1Q8IY45 258 aa11.47□□□□□ -0.57
USP39-208ENST00000455732 KRTAP10-1P60331 282 aa11.46□□□□□ -0.57
USP39-208ENST00000455732 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
USP39-208ENST00000455732 PPP1R2P9O14990 202 aa11.45□□□□□ -0.58
USP39-208ENST00000455732 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
USP39-208ENST00000455732 Q8N1X5 172 aa11.45□□□□□ -0.58
USP39-208ENST00000455732 IGLV5-52A0A0A0MRZ9 124 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 I3L3M4 83 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 UBE2L6O14933 153 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
USP39-208ENST00000455732 A0A1B0GXF2 115 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 H7C423 109 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 PPP1R17O96001 155 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 APCSP02743 223 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
USP39-208ENST00000455732 XGP55808 180 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 UQCC3Q6UW78 93 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 DEFB104AQ8WTQ1 72 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
USP39-208ENST00000455732 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 TRBV27A0A0K0K1C4 114 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 LECT2O14960 151 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 S100A8P05109 93 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 GCSHP23434 173 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 POLR2KP53803 58 aaKnown RBP11.42□□□□□ -0.58
USP39-208ENST00000455732 HBBP68871 147 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 REG3AQ06141 175 aa11.42□□□□□ -0.58
USP39-208ENST00000455732 PMCHP20382 165 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 CAMPP49913 170 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
USP39-208ENST00000455732 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 NRACQ8N912 160 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
USP39-208ENST00000455732 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
USP39-208ENST00000455732 TSHBP01222 138 aa11.4□□□□□ -0.58
USP39-208ENST00000455732 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
USP39-208ENST00000455732 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
USP39-208ENST00000455732 KRTAP26-1Q6PEX3 210 aa11.4□□□□□ -0.58
USP39-208ENST00000455732 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 F8W036 122 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 SMKR1H3BMG3 65 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 ESDP10768 282 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
USP39-208ENST00000455732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
USP39-208ENST00000455732 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
USP39-208ENST00000455732 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
USP39-208ENST00000455732 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
USP39-208ENST00000455732 C14orf177Q52M58 125 aa11.38□□□□□ -0.59
USP39-208ENST00000455732 TRBV24-1A0A075B6N3 115 aa11.37□□□□□ -0.59
USP39-208ENST00000455732 TMEM218A2RU14 115 aa11.37□□□□□ -0.59
USP39-208ENST00000455732 VCYO14598 125 aa11.37□□□□□ -0.59
USP39-208ENST00000455732 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
USP39-208ENST00000455732 AMMECR1LQ6DCA0 310 aa11.37□□□□□ -0.59
USP39-208ENST00000455732 FAT1Q14517 4588 aa11.36□□□□□ -0.59
USP39-208ENST00000455732 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
USP39-208ENST00000455732 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
USP39-208ENST00000455732 FGF6P10767 208 aa11.36□□□□□ -0.59
USP39-208ENST00000455732 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
USP39-208ENST00000455732 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
USP39-208ENST00000455732 CKS2P33552 79 aa11.35□□□□□ -0.59
USP39-208ENST00000455732 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 C7orf77A4D0Y5 90 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 USP17L23D6RBM5 183 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 PHOX2AO14813 284 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 PPBPP02775 128 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
USP39-208ENST00000455732 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
USP39-208ENST00000455732 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
USP39-208ENST00000455732 D6R8Y8 96 aa11.33□□□□□ -0.6
USP39-208ENST00000455732 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
USP39-208ENST00000455732 FCER1GP30273 86 aa11.33□□□□□ -0.6
USP39-208ENST00000455732 COMMD7Q86VX2 200 aa11.33□□□□□ -0.6
USP39-208ENST00000455732 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
USP39-208ENST00000455732 TMEM101Q96IK0 257 aa11.32□□□□□ -0.6
USP39-208ENST00000455732 BTF3L4Q96K17 158 aa11.32□□□□□ -0.6
USP39-208ENST00000455732 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
USP39-208ENST00000455732 FAM30AQ9NZY2 134 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms