RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 COTL1Q14019 142 aa14.29□□□□□ -0.12
PTPRA-208ENST00000455631 SCO2A0A1W2PP80 73 aa14.28□□□□□ -0.12
PTPRA-208ENST00000455631 PAGE4O60829 102 aa14.28□□□□□ -0.12
PTPRA-208ENST00000455631 DEFA1P59665 94 aa14.27□□□□□ -0.13
PTPRA-208ENST00000455631 Q5BKY6 102 aa14.27□□□□□ -0.13
PTPRA-208ENST00000455631 CARD19Q96LW7 228 aa14.27□□□□□ -0.13
PTPRA-208ENST00000455631 LINC00526Q96FQ7 95 aa14.26□□□□□ -0.13
PTPRA-208ENST00000455631 NIT2Q9NQR4 276 aa14.26□□□□□ -0.13
PTPRA-208ENST00000455631 ALG5Q9Y673 324 aa14.26□□□□□ -0.13
PTPRA-208ENST00000455631 AMMECR1LQ6DCA0 310 aa14.25□□□□□ -0.13
PTPRA-208ENST00000455631 ZNF664Q8N3J9 261 aa14.25□□□□□ -0.13
PTPRA-208ENST00000455631 FER1L6-AS1Q8NA97 138 aa14.25□□□□□ -0.13
PTPRA-208ENST00000455631 MUC2Q02817 5179 aa14.24□□□□□ -0.13
PTPRA-208ENST00000455631 FOXI1Q12951 378 aa14.24□□□□□ -0.13
PTPRA-208ENST00000455631 FXYD6-FXYD2A0A087WZ82 144 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 TRAV26-2A0A0B4J265 109 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 A0A0U1RQV1 116 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 PFDN1O60925 122 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 IGLC6P0CF74 106 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 CACNG7P62955 275 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 RNASEKQ6P5S7 137 aaKnown RBP14.22□□□□□ -0.13
PTPRA-208ENST00000455631 PSORS1C2Q9UIG4 136 aa14.22□□□□□ -0.13
PTPRA-208ENST00000455631 XCL1P47992 114 aa14.21□□□□□ -0.13
PTPRA-208ENST00000455631 MED28Q9H204 178 aa14.21□□□□□ -0.13
PTPRA-208ENST00000455631 PTTG1IPP53801 180 aa14.2□□□□□ -0.14
PTPRA-208ENST00000455631 IGHV1-58A0A0C4DH39 117 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 A0A1B0GV50 99 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 MT-ND6P03923 174 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 TRGC1P0CF51 173 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 GAGE2BQ13066 116 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 PRR26Q8N8Z3 221 aa14.19□□□□□ -0.14
PTPRA-208ENST00000455631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.18□□□□□ -0.14
PTPRA-208ENST00000455631 IGKV2-29A2NJV5 120 aaPredicted RBP14.18□□□□□ -0.14
PTPRA-208ENST00000455631 OR2D3Q8NGH3 330 aa14.18□□□□□ -0.14
PTPRA-208ENST00000455631 NTF3P20783 257 aa14.17□□□□□ -0.14
PTPRA-208ENST00000455631 RPS20P60866 119 aaKnown RBP14.17□□□□□ -0.14
PTPRA-208ENST00000455631 SYCNQ0VAF6 134 aa14.17□□□□□ -0.14
PTPRA-208ENST00000455631 Q6ZNX1 250 aa14.17□□□□□ -0.14
PTPRA-208ENST00000455631 TMUB2Q71RG4 321 aa14.17□□□□□ -0.14
PTPRA-208ENST00000455631 FGF6P10767 208 aa14.16□□□□□ -0.14
PTPRA-208ENST00000455631 ZNF561-AS1K7EIQ3 104 aa14.15□□□□□ -0.14
PTPRA-208ENST00000455631 CCL25O15444 150 aa14.15□□□□□ -0.14
PTPRA-208ENST00000455631 GIPP09681 153 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-208ENST00000455631 RPL35P42766 123 aaKnown RBP14.15□□□□□ -0.14
PTPRA-208ENST00000455631 C1orf137Q5JT78 98 aa14.15□□□□□ -0.14
PTPRA-208ENST00000455631 OR5A1Q8NGJ0 315 aa14.15□□□□□ -0.14
PTPRA-208ENST00000455631 SFT2D1Q8WV19 159 aa14.15□□□□□ -0.14
PTPRA-208ENST00000455631 LOC107984640A0A0U1RRK4 108 aa14.14□□□□□ -0.15
PTPRA-208ENST00000455631 KRTAP9-6A0A140TA67 174 aa14.14□□□□□ -0.15
PTPRA-208ENST00000455631 A0A1W2PNN7 141 aa14.14□□□□□ -0.15
PTPRA-208ENST00000455631 APCSP02743 223 aa14.14□□□□□ -0.15
PTPRA-208ENST00000455631 F2Z2F3 143 aa14.13□□□□□ -0.15
PTPRA-208ENST00000455631 H7C423 109 aa14.13□□□□□ -0.15
PTPRA-208ENST00000455631 PRR4Q16378 134 aa14.13□□□□□ -0.15
PTPRA-208ENST00000455631 NCR2O95944 276 aa14.12□□□□□ -0.15
PTPRA-208ENST00000455631 CAMPP49913 170 aa14.12□□□□□ -0.15
PTPRA-208ENST00000455631 LYZL1Q6UWQ5 148 aa14.12□□□□□ -0.15
PTPRA-208ENST00000455631 LINC00959A0A1B0GUT2 108 aa14.11□□□□□ -0.15
PTPRA-208ENST00000455631 FAM213BQ8TBF2 198 aa14.11□□□□□ -0.15
PTPRA-208ENST00000455631 CYTL1Q9NRR1 136 aa14.11□□□□□ -0.15
PTPRA-208ENST00000455631 XKRY2A2RUG3 117 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 BCL2P10415 239 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 ZNF25P17030 456 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-208ENST00000455631 C9orf116Q5BN46 136 aaPredicted RBP14.1□□□□□ -0.15
PTPRA-208ENST00000455631 CENPWQ5EE01 88 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 KCNRGQ8N5I3 272 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 GATD1Q8NB37 220 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 DIRC1Q969H9 104 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 ISOC2Q96AB3 205 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 BTF3L4Q96K17 158 aa14.1□□□□□ -0.15
PTPRA-208ENST00000455631 MBD3L1Q8WWY6 194 aa14.09□□□□□ -0.15
PTPRA-208ENST00000455631 RPL39LQ96EH5 51 aaKnown RBP14.09□□□□□ -0.15
PTPRA-208ENST00000455631 C19orf71A6NCJ1 209 aa14.08□□□□□ -0.16
PTPRA-208ENST00000455631 IFNA1P01562 189 aa14.08□□□□□ -0.16
PTPRA-208ENST00000455631 PHF5AQ7RTV0 110 aaKnown RBP14.08□□□□□ -0.16
PTPRA-208ENST00000455631 TMEM101Q96IK0 257 aa14.08□□□□□ -0.16
PTPRA-208ENST00000455631 SS18Q15532 418 aa14.07□□□□□ -0.16
PTPRA-208ENST00000455631 IGLV4-69A0A075B6H9 119 aa14.06□□□□□ -0.16
PTPRA-208ENST00000455631 ARPC5O15511 151 aa14.06□□□□□ -0.16
PTPRA-208ENST00000455631 TWIST1Q15672 202 aa14.06□□□□□ -0.16
PTPRA-208ENST00000455631 CD164L2Q6UWJ8 174 aa14.06□□□□□ -0.16
PTPRA-208ENST00000455631 APOMO95445 188 aa14.05□□□□□ -0.16
PTPRA-208ENST00000455631 IGLV7-43P04211 117 aa14.05□□□□□ -0.16
PTPRA-208ENST00000455631 RPL18AQ02543 176 aaKnown RBP14.05□□□□□ -0.16
PTPRA-208ENST00000455631 CTRLP40313 264 aa14.04□□□□□ -0.16
PTPRA-208ENST00000455631 NUP35Q8NFH5 326 aa14.04□□□□□ -0.16
PTPRA-208ENST00000455631 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
PTPRA-208ENST00000455631 IGLV1-50A0A075B6I6 118 aa14.03□□□□□ -0.16
PTPRA-208ENST00000455631 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
PTPRA-208ENST00000455631 H0Y9J4 135 aa14.03□□□□□ -0.16
PTPRA-208ENST00000455631 EIF5AP63241 154 aaKnown RBP14.03□□□□□ -0.16
PTPRA-208ENST00000455631 EIF5AL1Q6IS14 154 aaKnown RBP14.03□□□□□ -0.16
PTPRA-208ENST00000455631 CAMK2N2Q96S95 79 aa14.03□□□□□ -0.16
PTPRA-208ENST00000455631 UMAD1C9J7I0 102 aa14.02□□□□□ -0.17
PTPRA-208ENST00000455631 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.02□□□□□ -0.17
PTPRA-208ENST00000455631 MALP21145 153 aa14.02□□□□□ -0.17
PTPRA-208ENST00000455631 MEF2BQ02080 365 aaPredicted RBP14.02□□□□□ -0.17
PTPRA-208ENST00000455631 C9orf62Q8N4C0 152 aa14.02□□□□□ -0.17
PTPRA-208ENST00000455631 FAT4Q6V0I7 4981 aa14.02□□□□□ -0.17
PTPRA-208ENST00000455631 GNG4P50150 75 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms