RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 COX11Q9Y6N1 276 aa16.41■□□□□ 0.22
MSH2-203ENST00000454849 AMTP48728 403 aa16.4■□□□□ 0.22
MSH2-203ENST00000454849 PKIAP61925 76 aa16.4■□□□□ 0.22
MSH2-203ENST00000454849 C1orf43Q9BWL3 253 aa16.4■□□□□ 0.22
MSH2-203ENST00000454849 NTN5Q8WTR8 489 aaPredicted RBP16.39■□□□□ 0.21
MSH2-203ENST00000454849 RNF185Q96GF1 192 aa16.39■□□□□ 0.21
MSH2-203ENST00000454849 IGLV4-60A0A075B6I1 120 aa16.38■□□□□ 0.21
MSH2-203ENST00000454849 FAM231BA6NCW3 169 aa16.38■□□□□ 0.21
MSH2-203ENST00000454849 XGP55808 180 aa16.38■□□□□ 0.21
MSH2-203ENST00000454849 AMN1Q8IY45 258 aa16.38■□□□□ 0.21
MSH2-203ENST00000454849 SMDT1Q9H4I9 107 aa16.38■□□□□ 0.21
MSH2-203ENST00000454849 RIGQ13278 110 aa16.37■□□□□ 0.21
MSH2-203ENST00000454849 C20orf203Q8NBC4 194 aa16.37■□□□□ 0.21
MSH2-203ENST00000454849 TMEM191AQ9H0A3 160 aa16.37■□□□□ 0.21
MSH2-203ENST00000454849 SMKR1H3BMG3 65 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 UBE2L6O14933 153 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 RAB4AP20338 218 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 RAB14P61106 215 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 LINC01620Q4KN68 170 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 FRZBQ92765 325 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 NAT8BQ9UHF3 227 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 PCLOQ9Y6V0 5065 aa16.36■□□□□ 0.21
MSH2-203ENST00000454849 IGLV10-54A0A075B6I4 117 aa16.35■□□□□ 0.21
MSH2-203ENST00000454849 SDHAF1A6NFY7 115 aa16.35■□□□□ 0.21
MSH2-203ENST00000454849 HLA-DQA1P01909 254 aa16.35■□□□□ 0.21
MSH2-203ENST00000454849 RPS10P46783 165 aaKnown RBP16.35■□□□□ 0.21
MSH2-203ENST00000454849 NCR2O95944 276 aa16.34■□□□□ 0.21
MSH2-203ENST00000454849 PRR34Q9NV39 138 aa16.34■□□□□ 0.21
MSH2-203ENST00000454849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.33■□□□□ 0.2
MSH2-203ENST00000454849 SMIM27A0A1W2PRY6 76 aa16.33■□□□□ 0.2
MSH2-203ENST00000454849 IGKV2-29A2NJV5 120 aaPredicted RBP16.33■□□□□ 0.2
MSH2-203ENST00000454849 PMCHP20382 165 aa16.33■□□□□ 0.2
MSH2-203ENST00000454849 REG3AQ06141 175 aa16.33■□□□□ 0.2
MSH2-203ENST00000454849 MIAQ16674 131 aa16.33■□□□□ 0.2
MSH2-203ENST00000454849 CAMPP49913 170 aa16.32■□□□□ 0.2
MSH2-203ENST00000454849 Q8N1X5 172 aa16.32■□□□□ 0.2
MSH2-203ENST00000454849 FAM30AQ9NZY2 134 aa16.32■□□□□ 0.2
MSH2-203ENST00000454849 ST20Q9HBF5 79 aa16.31■□□□□ 0.2
MSH2-203ENST00000454849 IGKV3OR2-268A0A0C4DH90 116 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 TRBV6-5A0A0K0K1A5 114 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 A0A1B0GUV1 79 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 USP17L23D6RBM5 183 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 I3L3M4 83 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 APCSP02743 223 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 MRPL54Q6P161 138 aaKnown RBP16.29■□□□□ 0.2
MSH2-203ENST00000454849 KRTAP26-1Q6PEX3 210 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 MRAP2Q96G30 205 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 TMEM242Q9NWH2 141 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 ABCA13Q86UQ4 5058 aa16.29■□□□□ 0.2
MSH2-203ENST00000454849 SMR3BP02814 79 aaPredicted RBP16.28■□□□□ 0.2
MSH2-203ENST00000454849 RNASEKQ6P5S7 137 aaKnown RBP16.28■□□□□ 0.2
MSH2-203ENST00000454849 TMEM70Q9BUB7 260 aa16.28■□□□□ 0.2
MSH2-203ENST00000454849 TSHBP01222 138 aa16.27■□□□□ 0.2
MSH2-203ENST00000454849 IFITM2Q01629 132 aa16.27■□□□□ 0.2
MSH2-203ENST00000454849 AMMECR1LQ6DCA0 310 aa16.27■□□□□ 0.2
MSH2-203ENST00000454849 MRPL51Q4U2R6 128 aaKnown RBP16.26■□□□□ 0.19
MSH2-203ENST00000454849 FAM104BQ5XKR9 115 aa16.25■□□□□ 0.19
MSH2-203ENST00000454849 FGF6P10767 208 aa16.24■□□□□ 0.19
MSH2-203ENST00000454849 POLR2KP53803 58 aaKnown RBP16.24■□□□□ 0.19
MSH2-203ENST00000454849 CLLU1Q5K131 121 aa16.24■□□□□ 0.19
MSH2-203ENST00000454849 NRACQ8N912 160 aa16.24■□□□□ 0.19
MSH2-203ENST00000454849 PRSS1P07477 247 aa16.22■□□□□ 0.19
MSH2-203ENST00000454849 C14orf177Q52M58 125 aa16.21■□□□□ 0.19
MSH2-203ENST00000454849 HBBP68871 147 aa16.2■□□□□ 0.18
MSH2-203ENST00000454849 TRAV8-4A0A0B4J246 113 aa16.19■□□□□ 0.18
MSH2-203ENST00000454849 TRBV27A0A0K0K1C4 114 aa16.19■□□□□ 0.18
MSH2-203ENST00000454849 EPM2AB3EWF7 344 aa16.19■□□□□ 0.18
MSH2-203ENST00000454849 ESDP10768 282 aa16.19■□□□□ 0.18
MSH2-203ENST00000454849 CKS2P33552 79 aa16.19■□□□□ 0.18
MSH2-203ENST00000454849 A0A1B0GW15 77 aa16.18■□□□□ 0.18
MSH2-203ENST00000454849 A0A1B0GXF2 115 aa16.18■□□□□ 0.18
MSH2-203ENST00000454849 GAGE12HA6NDE8 117 aa16.18■□□□□ 0.18
MSH2-203ENST00000454849 VCYO14598 125 aa16.18■□□□□ 0.18
MSH2-203ENST00000454849 SUMO2P61956 95 aaKnown RBP16.18■□□□□ 0.18
MSH2-203ENST00000454849 H7C423 109 aa16.17■□□□□ 0.18
MSH2-203ENST00000454849 FCER1GP30273 86 aa16.17■□□□□ 0.18
MSH2-203ENST00000454849 PPP1R2P9O14990 202 aa16.16■□□□□ 0.18
MSH2-203ENST00000454849 D6R8Y8 96 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 PPP1R17O96001 155 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 MT-ND4LP03901 98 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 Q5VSD8 79 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 OR5A1Q8NGJ0 315 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 TMEM101Q96IK0 257 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 BTF3L4Q96K17 158 aa16.15■□□□□ 0.18
MSH2-203ENST00000454849 F8W036 122 aa16.14■□□□□ 0.17
MSH2-203ENST00000454849 S100A8P05109 93 aa16.14■□□□□ 0.17
MSH2-203ENST00000454849 PNRC1Q12796 327 aaPredicted RBP16.14■□□□□ 0.17
MSH2-203ENST00000454849 Q6ZSA8 131 aa16.14■□□□□ 0.17
MSH2-203ENST00000454849 CHCHD10Q8WYQ3 142 aaPredicted RBP16.14■□□□□ 0.17
MSH2-203ENST00000454849 hDV102S1A0JD36 115 aa16.13■□□□□ 0.17
MSH2-203ENST00000454849 C7orf77A4D0Y5 90 aa16.13■□□□□ 0.17
MSH2-203ENST00000454849 TNFRSF6BO95407 300 aa16.13■□□□□ 0.17
MSH2-203ENST00000454849 LINC00862A6NCI5 91 aa16.12■□□□□ 0.17
MSH2-203ENST00000454849 ADCYAP1P18509 176 aa16.12■□□□□ 0.17
MSH2-203ENST00000454849 FAT1Q14517 4588 aa16.11■□□□□ 0.17
MSH2-203ENST00000454849 NPYP01303 97 aa16.11■□□□□ 0.17
MSH2-203ENST00000454849 ZNF25P17030 456 aaPredicted RBP16.11■□□□□ 0.17
MSH2-203ENST00000454849 ANAPC16Q96DE5 110 aa16.11■□□□□ 0.17
MSH2-203ENST00000454849 KIR2DL4Q99706 377 aa16.11■□□□□ 0.17
MSH2-203ENST00000454849 DNAH8Q96JB1 4490 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms