RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PPDPFLQ8WWR9 84 aa11.62□□□□□ -0.55
SNX17-204ENST00000453453 PRADC1Q9BSG0 188 aa11.62□□□□□ -0.55
SNX17-204ENST00000453453 AGRNO00468 2067 aa11.61□□□□□ -0.55
SNX17-204ENST00000453453 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
SNX17-204ENST00000453453 CRYBA4P53673 196 aa11.61□□□□□ -0.55
SNX17-204ENST00000453453 BAALCQ8WXS3 180 aa11.61□□□□□ -0.55
SNX17-204ENST00000453453 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
SNX17-204ENST00000453453 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 RASL10AQ92737 203 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 C19orf73Q9NVV2 129 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 KLLNB2CW77 178 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
SNX17-204ENST00000453453 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
SNX17-204ENST00000453453 H3BVH4 76 aa11.59□□□□□ -0.55
SNX17-204ENST00000453453 NXPH4O95158 308 aa11.59□□□□□ -0.55
SNX17-204ENST00000453453 ASIPP42127 132 aa11.59□□□□□ -0.55
SNX17-204ENST00000453453 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
SNX17-204ENST00000453453 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
SNX17-204ENST00000453453 PRSS29PA6NIE9 313 aa11.58□□□□□ -0.56
SNX17-204ENST00000453453 TSPAN13O95857 204 aa11.58□□□□□ -0.56
SNX17-204ENST00000453453 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
SNX17-204ENST00000453453 PRR9Q5T870 116 aa11.58□□□□□ -0.56
SNX17-204ENST00000453453 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
SNX17-204ENST00000453453 WFDC10AQ9H1F0 79 aa11.58□□□□□ -0.56
SNX17-204ENST00000453453 RBMY1BA6NDE4 496 aaKnown RBP11.57□□□□□ -0.56
SNX17-204ENST00000453453 RBMY1EA6NEQ0 496 aaKnown RBP11.57□□□□□ -0.56
SNX17-204ENST00000453453 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
SNX17-204ENST00000453453 RBMY1DP0C7P1 496 aaKnown RBP11.57□□□□□ -0.56
SNX17-204ENST00000453453 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
SNX17-204ENST00000453453 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
SNX17-204ENST00000453453 TRAV12-2A0A075B6T6 113 aa11.56□□□□□ -0.56
SNX17-204ENST00000453453 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
SNX17-204ENST00000453453 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
SNX17-204ENST00000453453 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNX17-204ENST00000453453 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
SNX17-204ENST00000453453 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
SNX17-204ENST00000453453 INSP01308 110 aa11.55□□□□□ -0.56
SNX17-204ENST00000453453 RPL35AP18077 110 aaKnown RBP11.55□□□□□ -0.56
SNX17-204ENST00000453453 Q6ZUT4 128 aa11.55□□□□□ -0.56
SNX17-204ENST00000453453 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
SNX17-204ENST00000453453 GEMIN7Q9H840 131 aaKnown RBP11.55□□□□□ -0.56
SNX17-204ENST00000453453 A0A0J9YY99 117 aa11.54□□□□□ -0.56
SNX17-204ENST00000453453 A8MWV9 139 aa11.54□□□□□ -0.56
SNX17-204ENST00000453453 FAM159AQ6UWV7 190 aa11.54□□□□□ -0.56
SNX17-204ENST00000453453 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
SNX17-204ENST00000453453 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 PSMB2P49721 201 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 PMVKQ15126 192 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 Q8N1Y9 231 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 ANK2Q01484 3957 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 S100A4P26447 101 aaKnown RBP11.53□□□□□ -0.56
SNX17-204ENST00000453453 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 PLEKHB2Q96CS7 222 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 XCL2Q9UBD3 114 aa11.53□□□□□ -0.56
SNX17-204ENST00000453453 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.56
SNX17-204ENST00000453453 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
SNX17-204ENST00000453453 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
SNX17-204ENST00000453453 NFE4Q86UQ8 179 aa11.52□□□□□ -0.57
SNX17-204ENST00000453453 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
SNX17-204ENST00000453453 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
SNX17-204ENST00000453453 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
SNX17-204ENST00000453453 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
SNX17-204ENST00000453453 CRYGDP07320 174 aa11.5□□□□□ -0.57
SNX17-204ENST00000453453 Q6ZQT7 251 aa11.5□□□□□ -0.57
SNX17-204ENST00000453453 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
SNX17-204ENST00000453453 VCYO14598 125 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 MGPP08493 103 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 POLR2KP53803 58 aaKnown RBP11.49□□□□□ -0.57
SNX17-204ENST00000453453 APOC4P55056 127 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 LINC01587Q99440 93 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 PRO1854Q9UHT4 67 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 KIF25-AS1Q9Y6Z4 181 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 A0A0B4J2C4 111 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 TCL1BO95988 128 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 P0DMU3 169 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 FAM231AP0DMU4 169 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 FAM231CP0DMU5 169 aa11.49□□□□□ -0.57
SNX17-204ENST00000453453 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
SNX17-204ENST00000453453 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 CFC1BP0CG36 223 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 CFC1P0CG37 223 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 XGP55808 180 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 RHOHQ15669 191 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
SNX17-204ENST00000453453 TSHBP01222 138 aa11.47□□□□□ -0.57
SNX17-204ENST00000453453 MT-ATP8P03928 68 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms