RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
TNFRSF25-208ENST00000453341 CXCL1P09341 107 aa13.42□□□□□ -0.26
TNFRSF25-208ENST00000453341 AKR1C3P42330 323 aa13.42□□□□□ -0.26
TNFRSF25-208ENST00000453341 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
TNFRSF25-208ENST00000453341 TMEM243Q9BU79 118 aa13.42□□□□□ -0.26
TNFRSF25-208ENST00000453341 FAT4Q6V0I7 4981 aa13.41□□□□□ -0.26
TNFRSF25-208ENST00000453341 CCL20P78556 96 aa13.41□□□□□ -0.26
TNFRSF25-208ENST00000453341 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
TNFRSF25-208ENST00000453341 SCO2A0A1W2PP80 73 aa13.4□□□□□ -0.26
TNFRSF25-208ENST00000453341 M0QY20 66 aa13.4□□□□□ -0.26
TNFRSF25-208ENST00000453341 OR5AL1P0C617 328 aa13.4□□□□□ -0.26
TNFRSF25-208ENST00000453341 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
TNFRSF25-208ENST00000453341 SULT1A2P50226 295 aa13.39□□□□□ -0.27
TNFRSF25-208ENST00000453341 Q6ZRP5 223 aa13.39□□□□□ -0.27
TNFRSF25-208ENST00000453341 H7C1H1 209 aa13.38□□□□□ -0.27
TNFRSF25-208ENST00000453341 SMIM17P0DL12 118 aa13.38□□□□□ -0.27
TNFRSF25-208ENST00000453341 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF25-208ENST00000453341 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
TNFRSF25-208ENST00000453341 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF25-208ENST00000453341 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
TNFRSF25-208ENST00000453341 IGKV3OR2-268A0A0C4DH90 116 aa13.35□□□□□ -0.27
TNFRSF25-208ENST00000453341 MGPP08493 103 aa13.35□□□□□ -0.27
TNFRSF25-208ENST00000453341 SUMO4Q6EEV6 95 aa13.35□□□□□ -0.27
TNFRSF25-208ENST00000453341 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
TNFRSF25-208ENST00000453341 EIF5AL1Q6IS14 154 aaKnown RBP13.34□□□□□ -0.27
TNFRSF25-208ENST00000453341 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
TNFRSF25-208ENST00000453341 TRAV1-1A0A0B4J248 108 aa13.33□□□□□ -0.28
TNFRSF25-208ENST00000453341 S100A9P06702 114 aaKnown RBP13.33□□□□□ -0.28
TNFRSF25-208ENST00000453341 SLC51BQ86UW2 128 aa13.33□□□□□ -0.28
TNFRSF25-208ENST00000453341 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
TNFRSF25-208ENST00000453341 MLST8Q9BVC4 326 aa13.33□□□□□ -0.28
TNFRSF25-208ENST00000453341 KRTAP9-6A0A140TA67 174 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 FAM231BA6NCW3 169 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 UBE2L6O14933 153 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 CHCHD10Q8WYQ3 142 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 PGLYRP4Q96LB8 373 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 MANBALQ9NQG1 85 aa13.32□□□□□ -0.28
TNFRSF25-208ENST00000453341 RPL35P42766 123 aaKnown RBP13.3□□□□□ -0.28
TNFRSF25-208ENST00000453341 AMTP48728 403 aa13.29□□□□□ -0.28
TNFRSF25-208ENST00000453341 RASL11AQ6T310 242 aa13.29□□□□□ -0.28
TNFRSF25-208ENST00000453341 C11orf52Q96A22 123 aa13.29□□□□□ -0.28
TNFRSF25-208ENST00000453341 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
TNFRSF25-208ENST00000453341 A0A1B0GVG6 124 aa13.28□□□□□ -0.28
TNFRSF25-208ENST00000453341 TEX46H3BTG2 121 aa13.28□□□□□ -0.28
TNFRSF25-208ENST00000453341 FOXI1Q12951 378 aa13.28□□□□□ -0.28
TNFRSF25-208ENST00000453341 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
TNFRSF25-208ENST00000453341 COTL1Q14019 142 aa13.26□□□□□ -0.29
TNFRSF25-208ENST00000453341 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
TNFRSF25-208ENST00000453341 PRR26Q8N8Z3 221 aa13.26□□□□□ -0.29
TNFRSF25-208ENST00000453341 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 CENPWQ5EE01 88 aa13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 CARD19Q96LW7 228 aa13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 TPPP3Q9BW30 176 aa13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 PSORS1C2Q9UIG4 136 aa13.25□□□□□ -0.29
TNFRSF25-208ENST00000453341 IGLC6P0CF74 106 aa13.24□□□□□ -0.29
TNFRSF25-208ENST00000453341 BCL2P10415 239 aa13.24□□□□□ -0.29
TNFRSF25-208ENST00000453341 PKIGQ9Y2B9 76 aa13.24□□□□□ -0.29
TNFRSF25-208ENST00000453341 IFNA1P01562 189 aa13.23□□□□□ -0.29
TNFRSF25-208ENST00000453341 PTTG1IPP53801 180 aa13.23□□□□□ -0.29
TNFRSF25-208ENST00000453341 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
TNFRSF25-208ENST00000453341 MED9Q9NWA0 146 aa13.23□□□□□ -0.29
TNFRSF25-208ENST00000453341 A0A0U1RQV1 116 aa13.22□□□□□ -0.29
TNFRSF25-208ENST00000453341 A0A1W2PNN7 141 aa13.22□□□□□ -0.29
TNFRSF25-208ENST00000453341 LCE2AQ5TA79 106 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF25-208ENST00000453341 FER1L6-AS1Q8NA97 138 aa13.22□□□□□ -0.29
TNFRSF25-208ENST00000453341 PDE6DO43924 150 aa13.21□□□□□ -0.29
TNFRSF25-208ENST00000453341 TRBV20OR9-2A0A075B6H5 130 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 TRAV26-2A0A0B4J265 109 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 XCL1P47992 114 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 GNG4P50150 75 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 CACNG7P62955 275 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
TNFRSF25-208ENST00000453341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF25-208ENST00000453341 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
TNFRSF25-208ENST00000453341 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF25-208ENST00000453341 C19orf71A6NCJ1 209 aa13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 MT-ND6P03923 174 aa13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 NTF3P20783 257 aa13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 GAGE2BQ13066 116 aa13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 RNASEKQ6P5S7 137 aaKnown RBP13.18□□□□□ -0.3
TNFRSF25-208ENST00000453341 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
TNFRSF25-208ENST00000453341 OR2D3Q8NGH3 330 aa13.17□□□□□ -0.3
TNFRSF25-208ENST00000453341 CCL25O15444 150 aa13.16□□□□□ -0.3
TNFRSF25-208ENST00000453341 FGF6P10767 208 aa13.16□□□□□ -0.3
TNFRSF25-208ENST00000453341 BLOC1S1P78537 153 aa13.15□□□□□ -0.3
TNFRSF25-208ENST00000453341 PRR4Q16378 134 aa13.15□□□□□ -0.3
TNFRSF25-208ENST00000453341 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
TNFRSF25-208ENST00000453341 SMIM12Q96EX1 92 aa13.15□□□□□ -0.3
TNFRSF25-208ENST00000453341 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
TNFRSF25-208ENST00000453341 TRGC1P0CF51 173 aa13.14□□□□□ -0.31
TNFRSF25-208ENST00000453341 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
TNFRSF25-208ENST00000453341 GATD1Q8NB37 220 aa13.14□□□□□ -0.31
TNFRSF25-208ENST00000453341 LINC00959A0A1B0GUT2 108 aa13.13□□□□□ -0.31
TNFRSF25-208ENST00000453341 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
TNFRSF25-208ENST00000453341 C9orf116Q5BN46 136 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF25-208ENST00000453341 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
TNFRSF25-208ENST00000453341 H7C423 109 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms