RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
HLA-DPA1-244ENST00000453337 DNAH9Q9NYC9 4486 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 LINC00694P0DN24 101 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 AMTP48728 403 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 TMEM18Q96B42 140 aa8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 HUWE1Q7Z6Z7 4374 aaKnown RBP8.74□□□□□ -1.01
HLA-DPA1-244ENST00000453337 HBDP02042 147 aa8.73□□□□□ -1.01
HLA-DPA1-244ENST00000453337 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
HLA-DPA1-244ENST00000453337 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
HLA-DPA1-244ENST00000453337 A0A096LPF7 62 aa8.72□□□□□ -1.01
HLA-DPA1-244ENST00000453337 IGHV1-24A0A0C4DH33 117 aa8.72□□□□□ -1.01
HLA-DPA1-244ENST00000453337 BTF3P20290 206 aaKnown RBP8.72□□□□□ -1.01
HLA-DPA1-244ENST00000453337 PDZD11Q5EBL8 140 aa8.72□□□□□ -1.01
HLA-DPA1-244ENST00000453337 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
HLA-DPA1-244ENST00000453337 TRBV25-1A0A075B6N4 114 aa8.71□□□□□ -1.02
HLA-DPA1-244ENST00000453337 PMCHL1Q16048 86 aa8.71□□□□□ -1.02
HLA-DPA1-244ENST00000453337 C20orf203Q8NBC4 194 aa8.71□□□□□ -1.02
HLA-DPA1-244ENST00000453337 HSPB8Q9UJY1 196 aa8.71□□□□□ -1.02
HLA-DPA1-244ENST00000453337 CYSLTR1Q9Y271 337 aa8.71□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TRBV6-8A0A0A6YYG3 113 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TIRAPP58753 221 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 C2orf66Q6UXQ4 117 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 STAB2Q8WWQ8 2551 aa8.7□□□□□ -1.02
HLA-DPA1-244ENST00000453337 A0A096LNJ9 63 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IGLL5B9A064 214 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 H7C423 109 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 ATP5LO75964 103 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 FABP4P15090 132 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 KLK5Q9Y337 293 aaPredicted RBP8.69□□□□□ -1.02
HLA-DPA1-244ENST00000453337 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
HLA-DPA1-244ENST00000453337 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
HLA-DPA1-244ENST00000453337 ERASQ7Z444 233 aa8.68□□□□□ -1.02
HLA-DPA1-244ENST00000453337 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
HLA-DPA1-244ENST00000453337 UBE2L6O14933 153 aa8.67□□□□□ -1.02
HLA-DPA1-244ENST00000453337 LELP1Q5T871 98 aa8.67□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TMEM141Q96I45 108 aa8.67□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
HLA-DPA1-244ENST00000453337 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IFITM10A6NMD0 228 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 NPSP0C0P6 89 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TCTAP57738 103 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 PKIAP61925 76 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IFI27L1Q96BM0 104 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 SPANXA1Q9NS26 97 aa8.66□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 TIMM17AQ99595 171 aa8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 CSDC2Q9Y534 153 aaKnown RBP8.65□□□□□ -1.02
HLA-DPA1-244ENST00000453337 PRKDCP78527 4128 aaKnown RBP8.65□□□□□ -1.03
HLA-DPA1-244ENST00000453337 TMEM262E9PQX1 116 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 PRSS1P07477 247 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 CCL18P55774 89 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 ESRGQ1W209 222 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 Q6ZN92 141 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 OR10D4PQ8NGN7 298 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 TMEM101Q96IK0 257 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
HLA-DPA1-244ENST00000453337 LOC105371267A0A1B0GV96 52 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 FGF6P10767 208 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 GAGE6Q13070 117 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 LINC00173Q6ZV60 143 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 FBN3Q75N90 2809 aa8.63□□□□□ -1.03
HLA-DPA1-244ENST00000453337 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 C3orf79P0CE67 100 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 KRTDAPP60985 99 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 VCX2Q9H322 139 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 APLNQ9ULZ1 77 aa8.62□□□□□ -1.03
HLA-DPA1-244ENST00000453337 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
HLA-DPA1-244ENST00000453337 AKR1D1P51857 326 aa8.61□□□□□ -1.03
HLA-DPA1-244ENST00000453337 PET117Q6UWS5 81 aa8.61□□□□□ -1.03
HLA-DPA1-244ENST00000453337 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
HLA-DPA1-244ENST00000453337 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms