RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PHOX2AO14813 284 aa16.34■□□□□ 0.21
CPSF4-207ENST00000451876 IGHV1-24A0A0C4DH33 117 aa16.33■□□□□ 0.2
CPSF4-207ENST00000451876 TSHBP01222 138 aa16.33■□□□□ 0.2
CPSF4-207ENST00000451876 LINC01556Q5JQF7 62 aa16.33■□□□□ 0.2
CPSF4-207ENST00000451876 NIT1Q86X76 327 aa16.33■□□□□ 0.2
CPSF4-207ENST00000451876 CHCHD5Q9BSY4 110 aa16.33■□□□□ 0.2
CPSF4-207ENST00000451876 IGHV3-30P01768 117 aa16.32■□□□□ 0.2
CPSF4-207ENST00000451876 IGHV3-33P01772 117 aa16.32■□□□□ 0.2
CPSF4-207ENST00000451876 IGHV3-30-3P0DP02 117 aa16.32■□□□□ 0.2
CPSF4-207ENST00000451876 IGHV3-30-5P0DP03 117 aa16.32■□□□□ 0.2
CPSF4-207ENST00000451876 VCYO14598 125 aa16.31■□□□□ 0.2
CPSF4-207ENST00000451876 AMTP48728 403 aa16.31■□□□□ 0.2
CPSF4-207ENST00000451876 SMIM2Q9BVW6 85 aa16.31■□□□□ 0.2
CPSF4-207ENST00000451876 LAMTOR2Q9Y2Q5 125 aa16.31■□□□□ 0.2
CPSF4-207ENST00000451876 DNAH2Q9P225 4427 aa16.3■□□□□ 0.2
CPSF4-207ENST00000451876 RPL32P62910 135 aaKnown RBP16.3■□□□□ 0.2
CPSF4-207ENST00000451876 FABP9Q0Z7S8 132 aa16.3■□□□□ 0.2
CPSF4-207ENST00000451876 TMEM243Q9BU79 118 aa16.3■□□□□ 0.2
CPSF4-207ENST00000451876 TRAPPC1Q9Y5R8 145 aa16.3■□□□□ 0.2
CPSF4-207ENST00000451876 TTC32Q5I0X7 151 aa16.29■□□□□ 0.2
CPSF4-207ENST00000451876 CHCHD7Q9BUK0 85 aa16.29■□□□□ 0.2
CPSF4-207ENST00000451876 GAGE6Q13070 117 aa16.28■□□□□ 0.2
CPSF4-207ENST00000451876 MPV17L2Q567V2 206 aa16.28■□□□□ 0.2
CPSF4-207ENST00000451876 LOC389332A0A1B0GUA5 103 aa16.27■□□□□ 0.2
CPSF4-207ENST00000451876 TMEM262E9PQX1 116 aa16.27■□□□□ 0.2
CPSF4-207ENST00000451876 KIR2DL4Q99706 377 aa16.27■□□□□ 0.2
CPSF4-207ENST00000451876 MAP1LC3AQ9H492 121 aa16.27■□□□□ 0.2
CPSF4-207ENST00000451876 ALKBH7Q9BT30 221 aaPredicted RBP16.27■□□□□ 0.19
CPSF4-207ENST00000451876 A0A087WX48 190 aa16.26■□□□□ 0.19
CPSF4-207ENST00000451876 PRSS47A8MTI9 375 aa16.26■□□□□ 0.19
CPSF4-207ENST00000451876 Q8N976 141 aa16.26■□□□□ 0.19
CPSF4-207ENST00000451876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-207ENST00000451876 IGKV2-29A2NJV5 120 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-207ENST00000451876 ESDP10768 282 aa16.25■□□□□ 0.19
CPSF4-207ENST00000451876 S100A1P23297 94 aa16.25■□□□□ 0.19
CPSF4-207ENST00000451876 FCER1GP30273 86 aa16.25■□□□□ 0.19
CPSF4-207ENST00000451876 COLCA2A8K830 154 aa16.24■□□□□ 0.19
CPSF4-207ENST00000451876 TCAPO15273 167 aa16.24■□□□□ 0.19
CPSF4-207ENST00000451876 TRAV9-2A0A087WT02 112 aa16.23■□□□□ 0.19
CPSF4-207ENST00000451876 K7EP13 123 aa16.23■□□□□ 0.19
CPSF4-207ENST00000451876 UBE2L6O14933 153 aa16.23■□□□□ 0.19
CPSF4-207ENST00000451876 C10orf126Q8N4M7 172 aa16.23■□□□□ 0.19
CPSF4-207ENST00000451876 FRAS1Q86XX4 4008 aa16.22■□□□□ 0.19
CPSF4-207ENST00000451876 RBX1P62877 108 aa16.22■□□□□ 0.19
CPSF4-207ENST00000451876 DNAH10Q8IVF4 4471 aa16.21■□□□□ 0.19
CPSF4-207ENST00000451876 IBA57-AS1B1ANH7 110 aa16.2■□□□□ 0.18
CPSF4-207ENST00000451876 IFI27P40305 119 aaPredicted RBP16.2■□□□□ 0.18
CPSF4-207ENST00000451876 PKIAP61925 76 aa16.2■□□□□ 0.18
CPSF4-207ENST00000451876 Q8N8P6 123 aa16.2■□□□□ 0.18
CPSF4-207ENST00000451876 KLK12Q9UKR0 248 aa16.2■□□□□ 0.18
CPSF4-207ENST00000451876 IGLV4-60A0A075B6I1 120 aa16.19■□□□□ 0.18
CPSF4-207ENST00000451876 C1orf134Q5TEV5 83 aa16.19■□□□□ 0.18
CPSF4-207ENST00000451876 C6orf223Q8N319 242 aa16.19■□□□□ 0.18
CPSF4-207ENST00000451876 ANGP03950 147 aaKnown RBP16.18■□□□□ 0.18
CPSF4-207ENST00000451876 FGF6P10767 208 aa16.18■□□□□ 0.18
CPSF4-207ENST00000451876 RAB5AP20339 215 aa16.18■□□□□ 0.18
CPSF4-207ENST00000451876 C20orf203Q8NBC4 194 aa16.18■□□□□ 0.18
CPSF4-207ENST00000451876 A0A1B0GUV1 79 aa16.17■□□□□ 0.18
CPSF4-207ENST00000451876 H7C423 109 aa16.17■□□□□ 0.18
CPSF4-207ENST00000451876 NXT2Q9NPJ8 142 aaKnown RBP16.17■□□□□ 0.18
CPSF4-207ENST00000451876 TRGC2P03986 189 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 LAGE3Q14657 143 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 Q9HAA7 133 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 RTL8CO15255 209 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 RPL39P62891 51 aaKnown RBP16.16■□□□□ 0.18
CPSF4-207ENST00000451876 AMMECR1LQ6DCA0 310 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 RNASEKQ6P5S7 137 aaKnown RBP16.16■□□□□ 0.18
CPSF4-207ENST00000451876 C18orf32Q8TCD1 76 aa16.16■□□□□ 0.18
CPSF4-207ENST00000451876 CLPSL2Q6UWE3 100 aa16.14■□□□□ 0.17
CPSF4-207ENST00000451876 PRSS3P2Q8NHM4 247 aa16.14■□□□□ 0.17
CPSF4-207ENST00000451876 Q6ZRN7 208 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-207ENST00000451876 MRPL52Q86TS9 123 aaKnown RBP16.13■□□□□ 0.17
CPSF4-207ENST00000451876 LINC00269Q8N2A0 174 aa16.13■□□□□ 0.17
CPSF4-207ENST00000451876 UBE2WQ96B02 151 aa16.13■□□□□ 0.17
CPSF4-207ENST00000451876 DNAH17Q9UFH2 4485 aa16.12■□□□□ 0.17
CPSF4-207ENST00000451876 ENHOQ6UWT2 76 aa16.12■□□□□ 0.17
CPSF4-207ENST00000451876 UBE2D4Q9Y2X8 147 aa16.12■□□□□ 0.17
CPSF4-207ENST00000451876 FAT2Q9NYQ8 4349 aa16.12■□□□□ 0.17
CPSF4-207ENST00000451876 ZNF25P17030 456 aaPredicted RBP16.12■□□□□ 0.17
CPSF4-207ENST00000451876 BTF3P20290 206 aaKnown RBP16.12■□□□□ 0.17
CPSF4-207ENST00000451876 PRR34Q9NV39 138 aa16.12■□□□□ 0.17
CPSF4-207ENST00000451876 K7EMI3 77 aa16.11■□□□□ 0.17
CPSF4-207ENST00000451876 URB1-AS1Q96HZ7 61 aa16.1■□□□□ 0.17
CPSF4-207ENST00000451876 TRAV8-3A0A0A6YYJ7 113 aa16.09■□□□□ 0.17
CPSF4-207ENST00000451876 CRPP02741 224 aa16.09■□□□□ 0.17
CPSF4-207ENST00000451876 ORMDL2Q53FV1 153 aa16.09■□□□□ 0.17
CPSF4-207ENST00000451876 TMEM18Q96B42 140 aa16.09■□□□□ 0.17
CPSF4-207ENST00000451876 LINC01546A6NGU7 62 aa16.08■□□□□ 0.17
CPSF4-207ENST00000451876 REG3AQ06141 175 aa16.08■□□□□ 0.17
CPSF4-207ENST00000451876 OR5A1Q8NGJ0 315 aa16.08■□□□□ 0.17
CPSF4-207ENST00000451876 NFE4Q86UQ8 179 aa16.08■□□□□ 0.16
CPSF4-207ENST00000451876 FA2HQ7L5A8 372 aa16.07■□□□□ 0.16
CPSF4-207ENST00000451876 TMEM101Q96IK0 257 aa16.07■□□□□ 0.16
CPSF4-207ENST00000451876 CDC42SE2Q9NRR3 84 aa16.07■□□□□ 0.16
CPSF4-207ENST00000451876 CSDC2Q9Y534 153 aaKnown RBP16.07■□□□□ 0.16
CPSF4-207ENST00000451876 Q0VG73 95 aa16.06■□□□□ 0.16
CPSF4-207ENST00000451876 C2orf66Q6UXQ4 117 aa16.06■□□□□ 0.16
CPSF4-207ENST00000451876 TIMM21Q9BVV7 248 aa16.06■□□□□ 0.16
CPSF4-207ENST00000451876 DGAT2L7PQ6IED9 249 aa16.05■□□□□ 0.16
CPSF4-207ENST00000451876 FAM104AQ969W3 186 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms