RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 REG3AQ06141 175 aa6.34□□□□□ -1.39
USP54-207ENST00000451492 COTL1Q14019 142 aa6.34□□□□□ -1.39
USP54-207ENST00000451492 MIAQ16674 131 aa6.34□□□□□ -1.39
USP54-207ENST00000451492 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
USP54-207ENST00000451492 BORCS7Q96B45 105 aa6.34□□□□□ -1.39
USP54-207ENST00000451492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
USP54-207ENST00000451492 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
USP54-207ENST00000451492 A8MWL6 223 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 LINC01551Q86U37 167 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 CNFNQ9BYD5 112 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
USP54-207ENST00000451492 HIGD1CA8MV81 97 aa6.32□□□□□ -1.4
USP54-207ENST00000451492 ADIRFQ15847 76 aa6.32□□□□□ -1.4
USP54-207ENST00000451492 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
USP54-207ENST00000451492 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
USP54-207ENST00000451492 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 APCSP02743 223 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 PRSS1P07477 247 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 AMMECR1LQ6DCA0 310 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
USP54-207ENST00000451492 Q6ZSA8 131 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
USP54-207ENST00000451492 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
USP54-207ENST00000451492 NCR2O95944 276 aa6.3□□□□□ -1.4
USP54-207ENST00000451492 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
USP54-207ENST00000451492 CT83Q5H943 113 aa6.3□□□□□ -1.4
USP54-207ENST00000451492 TSKUQ8WUA8 353 aa6.3□□□□□ -1.4
USP54-207ENST00000451492 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
USP54-207ENST00000451492 A0A1B0GUT8 65 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 C9JQL5 133 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 SMKR1H3BMG3 65 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 PMCHP20382 165 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 RPL23P62829 140 aaKnown RBP6.29□□□□□ -1.4
USP54-207ENST00000451492 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 KRTAP26-1Q6PEX3 210 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 AMN1Q8IY45 258 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 ISOC2Q96AB3 205 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 OSTCQ9NRP0 149 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 TMEM242Q9NWH2 141 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 V9GYV3 84 aa6.29□□□□□ -1.4
USP54-207ENST00000451492 A0A1B0GUV1 79 aa6.28□□□□□ -1.4
USP54-207ENST00000451492 GAGE12HA6NDE8 117 aa6.28□□□□□ -1.4
USP54-207ENST00000451492 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
USP54-207ENST00000451492 TEX261Q6UWH6 196 aa6.28□□□□□ -1.4
USP54-207ENST00000451492 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
USP54-207ENST00000451492 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
USP54-207ENST00000451492 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 TRAV8-4A0A0B4J246 113 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 I3L3M4 83 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 FGF6P10767 208 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 RAB4AP20338 218 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 RIGQ13278 110 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 PEA15Q15121 130 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 FAM74A3Q4VXF1 159 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 RNF185Q96GF1 192 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 CHAC1Q9BUX1 264 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 TMEM191AQ9H0A3 160 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
USP54-207ENST00000451492 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
USP54-207ENST00000451492 NDUFS6O75380 124 aaKnown RBP6.26□□□□□ -1.41
USP54-207ENST00000451492 TSHBP01222 138 aa6.26□□□□□ -1.41
USP54-207ENST00000451492 PLA2G1BP04054 148 aaKnown RBP6.26□□□□□ -1.41
USP54-207ENST00000451492 HIGD2BQ4VC39 106 aa6.26□□□□□ -1.41
USP54-207ENST00000451492 NAT8BQ9UHF3 227 aa6.26□□□□□ -1.41
USP54-207ENST00000451492 FAM231BA6NCW3 169 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 CAMPP49913 170 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 MRPL54Q6P161 138 aaKnown RBP6.25□□□□□ -1.41
USP54-207ENST00000451492 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
USP54-207ENST00000451492 MRAP2Q96G30 205 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 TMEM101Q96IK0 257 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 BTF3L4Q96K17 158 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 AP5S1Q9NUS5 200 aa6.25□□□□□ -1.41
USP54-207ENST00000451492 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 PANO1I0J062 215 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 FCER1GP30273 86 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 XCL1P47992 114 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 OR5A1Q8NGJ0 315 aa6.24□□□□□ -1.41
USP54-207ENST00000451492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
USP54-207ENST00000451492 HERC1Q15751 4861 aa6.23□□□□□ -1.41
USP54-207ENST00000451492 C7orf77A4D0Y5 90 aa6.23□□□□□ -1.41
USP54-207ENST00000451492 CHTF8P0CG12 524 aa6.23□□□□□ -1.41
USP54-207ENST00000451492 ZNF25P17030 456 aaPredicted RBP6.23□□□□□ -1.41
USP54-207ENST00000451492 MRPL51Q4U2R6 128 aaKnown RBP6.23□□□□□ -1.41
USP54-207ENST00000451492 RNASE13Q5GAN3 156 aaKnown RBP6.23□□□□□ -1.41
USP54-207ENST00000451492 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
USP54-207ENST00000451492 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.22□□□□□ -1.41
USP54-207ENST00000451492 SMIM27A0A1W2PRY6 76 aa6.22□□□□□ -1.41
USP54-207ENST00000451492 H7C423 109 aa6.22□□□□□ -1.41
USP54-207ENST00000451492 CCL25O15444 150 aa6.22□□□□□ -1.41
USP54-207ENST00000451492 ESDP10768 282 aa6.22□□□□□ -1.41
USP54-207ENST00000451492 POLR2KP53803 58 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms