RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
FAM3A-216ENST00000449971 FOXA3P55318 350 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-216ENST00000449971 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
FAM3A-216ENST00000449971 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-216ENST00000449971 CT83Q5H943 113 aa11.53□□□□□ -0.56
FAM3A-216ENST00000449971 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
FAM3A-216ENST00000449971 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
FAM3A-216ENST00000449971 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
FAM3A-216ENST00000449971 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
FAM3A-216ENST00000449971 OSTCQ9NRP0 149 aa11.52□□□□□ -0.57
FAM3A-216ENST00000449971 LRP1Q07954 4544 aaKnown RBP11.51□□□□□ -0.57
FAM3A-216ENST00000449971 COTL1Q14019 142 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 CLPSL2Q6UWE3 100 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
FAM3A-216ENST00000449971 MIAQ16674 131 aa11.5□□□□□ -0.57
FAM3A-216ENST00000449971 FAM74A3Q4VXF1 159 aa11.5□□□□□ -0.57
FAM3A-216ENST00000449971 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
FAM3A-216ENST00000449971 HIGD1CA8MV81 97 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 C9JQL5 133 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 AMTP48728 403 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 PEA15Q15121 130 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
FAM3A-216ENST00000449971 A0A1B0GUT8 65 aa11.48□□□□□ -0.57
FAM3A-216ENST00000449971 UBE2L6O14933 153 aa11.48□□□□□ -0.57
FAM3A-216ENST00000449971 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
FAM3A-216ENST00000449971 SRSF3P84103 164 aaKnown RBP11.48□□□□□ -0.57
FAM3A-216ENST00000449971 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
FAM3A-216ENST00000449971 FAM231BA6NCW3 169 aa11.47□□□□□ -0.57
FAM3A-216ENST00000449971 RPL23P62829 140 aaKnown RBP11.47□□□□□ -0.57
FAM3A-216ENST00000449971 C14orf177Q52M58 125 aa11.47□□□□□ -0.57
FAM3A-216ENST00000449971 C20orf203Q8NBC4 194 aa11.47□□□□□ -0.57
FAM3A-216ENST00000449971 ISOC2Q96AB3 205 aa11.47□□□□□ -0.57
FAM3A-216ENST00000449971 V9GYV3 84 aa11.47□□□□□ -0.57
FAM3A-216ENST00000449971 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.57
FAM3A-216ENST00000449971 A0A1B0GUV1 79 aa11.46□□□□□ -0.57
FAM3A-216ENST00000449971 REG3AQ06141 175 aa11.46□□□□□ -0.57
FAM3A-216ENST00000449971 ADIRFQ15847 76 aa11.46□□□□□ -0.57
FAM3A-216ENST00000449971 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
FAM3A-216ENST00000449971 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.58
FAM3A-216ENST00000449971 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
FAM3A-216ENST00000449971 NAT8Q9UHE5 227 aa11.45□□□□□ -0.58
FAM3A-216ENST00000449971 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
FAM3A-216ENST00000449971 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
FAM3A-216ENST00000449971 PMCHP20382 165 aa11.44□□□□□ -0.58
FAM3A-216ENST00000449971 RIGQ13278 110 aa11.44□□□□□ -0.58
FAM3A-216ENST00000449971 TMEM191AQ9H0A3 160 aa11.44□□□□□ -0.58
FAM3A-216ENST00000449971 NCR2O95944 276 aa11.43□□□□□ -0.58
FAM3A-216ENST00000449971 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
FAM3A-216ENST00000449971 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
FAM3A-216ENST00000449971 SMDT1Q9H4I9 107 aa11.43□□□□□ -0.58
FAM3A-216ENST00000449971 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 RAB4AP20338 218 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 AMN1Q8IY45 258 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 RNF185Q96GF1 192 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
FAM3A-216ENST00000449971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
FAM3A-216ENST00000449971 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
FAM3A-216ENST00000449971 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
FAM3A-216ENST00000449971 I3L3M4 83 aa11.41□□□□□ -0.58
FAM3A-216ENST00000449971 APCSP02743 223 aa11.41□□□□□ -0.58
FAM3A-216ENST00000449971 PRSS1P07477 247 aa11.4□□□□□ -0.58
FAM3A-216ENST00000449971 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
FAM3A-216ENST00000449971 Q6ZSA8 131 aa11.4□□□□□ -0.58
FAM3A-216ENST00000449971 MRAP2Q96G30 205 aa11.4□□□□□ -0.58
FAM3A-216ENST00000449971 IGKV3OR2-268A0A0C4DH90 116 aa11.39□□□□□ -0.59
FAM3A-216ENST00000449971 SMIM27A0A1W2PRY6 76 aa11.38□□□□□ -0.59
FAM3A-216ENST00000449971 SMKR1H3BMG3 65 aa11.38□□□□□ -0.59
FAM3A-216ENST00000449971 H7C423 109 aa11.38□□□□□ -0.59
FAM3A-216ENST00000449971 RPS10P46783 165 aaKnown RBP11.38□□□□□ -0.59
FAM3A-216ENST00000449971 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
FAM3A-216ENST00000449971 FGF6P10767 208 aa11.37□□□□□ -0.59
FAM3A-216ENST00000449971 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
FAM3A-216ENST00000449971 TSHBP01222 138 aa11.36□□□□□ -0.59
FAM3A-216ENST00000449971 CAMPP49913 170 aa11.36□□□□□ -0.59
FAM3A-216ENST00000449971 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
FAM3A-216ENST00000449971 RAB14P61106 215 aa11.36□□□□□ -0.59
FAM3A-216ENST00000449971 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
FAM3A-216ENST00000449971 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
FAM3A-216ENST00000449971 PKHD1L1Q86WI1 4243 aa11.35□□□□□ -0.59
FAM3A-216ENST00000449971 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
FAM3A-216ENST00000449971 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
FAM3A-216ENST00000449971 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
FAM3A-216ENST00000449971 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 hDV102S1A0JD36 115 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 VCYO14598 125 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 PPP1R17O96001 155 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 OXTP01178 125 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 ESDP10768 282 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
FAM3A-216ENST00000449971 A0A1B0GW15 77 aa11.33□□□□□ -0.6
FAM3A-216ENST00000449971 ZNF25P17030 456 aaPredicted RBP11.33□□□□□ -0.6
FAM3A-216ENST00000449971 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
FAM3A-216ENST00000449971 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms