RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	RPL39L	Q96EH5	51 aa	Known RBP	10.4	□□□□□ -0.74
HDLBP-223	ENST00000449864	GFRA4	Q9GZZ7	299 aa		10.4	□□□□□ -0.74
HDLBP-223	ENST00000449864	OSTC	Q9NRP0	149 aa		10.4	□□□□□ -0.74
HDLBP-223	ENST00000449864		A0A1B0GUT8	65 aa		10.39	□□□□□ -0.75
HDLBP-223	ENST00000449864	HIGD1C	A8MV81	97 aa		10.39	□□□□□ -0.75
HDLBP-223	ENST00000449864	TMEM241	Q24JQ0	296 aa		10.39	□□□□□ -0.75
HDLBP-223	ENST00000449864	PRR34	Q9NV39	138 aa		10.39	□□□□□ -0.75
HDLBP-223	ENST00000449864	REG3A	Q06141	175 aa		10.38	□□□□□ -0.75
HDLBP-223	ENST00000449864	PEA15	Q15121	130 aa		10.38	□□□□□ -0.75
HDLBP-223	ENST00000449864	ADIRF	Q15847	76 aa		10.38	□□□□□ -0.75
HDLBP-223	ENST00000449864	FAM231B	A6NCW3	169 aa		10.37	□□□□□ -0.75
HDLBP-223	ENST00000449864		Q5VSD8	79 aa		10.37	□□□□□ -0.75
HDLBP-223	ENST00000449864	ISOC2	Q96AB3	205 aa		10.37	□□□□□ -0.75
HDLBP-223	ENST00000449864	NAT8	Q9UHE5	227 aa		10.37	□□□□□ -0.75
HDLBP-223	ENST00000449864	USP17L23	D6RBM5	183 aa		10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	APCS	P02743	223 aa		10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	SMR3B	P02814	79 aa	Predicted RBP	10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	RPL23	P62829	140 aa	Known RBP	10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	LINC01620	Q4KN68	170 aa		10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	C20orf203	Q8NBC4	194 aa		10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864		V9GYV3	84 aa		10.36	□□□□□ -0.75
HDLBP-223	ENST00000449864	IGLV4-60	A0A075B6I1	120 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	IGLV10-54	A0A075B6I4	117 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864		A0A1B0GUV1	79 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	SDHAF1	A6NFY7	115 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864		C9JQL5	133 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	NCR2	O95944	276 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	AMMECR1L	Q6DCA0	310 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	TMEM191A	Q9H0A3	160 aa		10.35	□□□□□ -0.75
HDLBP-223	ENST00000449864	FAM229A	H3BQW9	127 aa		10.34	□□□□□ -0.75
HDLBP-223	ENST00000449864	SRSF3	P84103	164 aa	Known RBP	10.34	□□□□□ -0.75
HDLBP-223	ENST00000449864	RIG	Q13278	110 aa		10.34	□□□□□ -0.75
HDLBP-223	ENST00000449864	SMDT1	Q9H4I9	107 aa		10.34	□□□□□ -0.75
HDLBP-223	ENST00000449864	FAM30A	Q9NZY2	134 aa		10.34	□□□□□ -0.75
HDLBP-223	ENST00000449864	TRAV8-4	A0A0B4J246	113 aa		10.33	□□□□□ -0.76
HDLBP-223	ENST00000449864	PMCH	P20382	165 aa		10.33	□□□□□ -0.76
HDLBP-223	ENST00000449864		Q6ZSA8	131 aa		10.33	□□□□□ -0.76
HDLBP-223	ENST00000449864	ST20	Q9HBF5	79 aa		10.33	□□□□□ -0.76
HDLBP-223	ENST00000449864	NAT8B	Q9UHF3	227 aa		10.33	□□□□□ -0.76
HDLBP-223	ENST00000449864	TRBV6-5	A0A0K0K1A5	114 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864		I3L3M4	83 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864	KRTAP26-1	Q6PEX3	210 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864	AMN1	Q8IY45	258 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864	NUP35	Q8NFH5	326 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864	MRAP2	Q96G30	205 aa		10.32	□□□□□ -0.76
HDLBP-223	ENST00000449864	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.31	□□□□□ -0.76
HDLBP-223	ENST00000449864	IGKV3OR2-268	A0A0C4DH90	116 aa		10.31	□□□□□ -0.76
HDLBP-223	ENST00000449864	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.31	□□□□□ -0.76
HDLBP-223	ENST00000449864	RNASEK	Q6P5S7	137 aa	Known RBP	10.31	□□□□□ -0.76
HDLBP-223	ENST00000449864	RNF185	Q96GF1	192 aa		10.31	□□□□□ -0.76
HDLBP-223	ENST00000449864		H7C423	109 aa		10.3	□□□□□ -0.76
HDLBP-223	ENST00000449864	GAS8-AS1	O95177	125 aa		10.3	□□□□□ -0.76
HDLBP-223	ENST00000449864	RAB4A	P20338	218 aa		10.3	□□□□□ -0.76
HDLBP-223	ENST00000449864	PRSS1	P07477	247 aa		10.29	□□□□□ -0.76
HDLBP-223	ENST00000449864	INAFM2	P0DMQ5	153 aa		10.29	□□□□□ -0.76
HDLBP-223	ENST00000449864	FGF6	P10767	208 aa		10.29	□□□□□ -0.76
HDLBP-223	ENST00000449864	RPS10	P46783	165 aa	Known RBP	10.29	□□□□□ -0.76
HDLBP-223	ENST00000449864	TMEM242	Q9NWH2	141 aa		10.29	□□□□□ -0.76
HDLBP-223	ENST00000449864	SMIM27	A0A1W2PRY6	76 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864	SMKR1	H3BMG3	65 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864	TSHB	P01222	138 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864	RAB14	P61106	215 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864	TMEM101	Q96IK0	257 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864	BTF3L4	Q96K17	158 aa		10.28	□□□□□ -0.76
HDLBP-223	ENST00000449864		A0A1B0GW15	77 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	hDV102S1	A0JD36	115 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	PPP1R17	O96001	155 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	ZNF25	P17030	456 aa	Predicted RBP	10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	CAMP	P49913	170 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	DGAT2L7P	Q6IED9	249 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	SCX	Q7RTU7	201 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	CLRN3	Q8NCR9	226 aa		10.27	□□□□□ -0.77
HDLBP-223	ENST00000449864	FCER1G	P30273	86 aa		10.26	□□□□□ -0.77
HDLBP-223	ENST00000449864	LINC00528	Q8N1L1	170 aa		10.26	□□□□□ -0.77
HDLBP-223	ENST00000449864	TRBV27	A0A0K0K1C4	114 aa		10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	GAGE12H	A6NDE8	117 aa		10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	S100A8	P05109	93 aa		10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	POLR2K	P53803	58 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	MRPL54	Q6P161	138 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	OR5A1	Q8NGJ0	315 aa		10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	CHAC1	Q9BUX1	264 aa		10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	SRRM2	Q9UQ35	2752 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-223	ENST00000449864	C7orf77	A4D0Y5	90 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	VCY	O14598	125 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	PPP1R2P9	O14990	202 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	PLA2G1B	P04054	148 aa	Known RBP	10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	ESD	P10768	282 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	SUMO2	P61956	95 aa	Known RBP	10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	FAM104B	Q5XKR9	115 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	AP5S1	Q9NUS5	200 aa		10.24	□□□□□ -0.77
HDLBP-223	ENST00000449864	HBB	P68871	147 aa		10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	MRPL51	Q4U2R6	128 aa	Known RBP	10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	NRAC	Q8N912	160 aa		10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	C9orf163	Q8N9P6	203 aa		10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	KIR2DL4	Q99706	377 aa		10.23	□□□□□ -0.77
HDLBP-223	ENST00000449864	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.22	□□□□□ -0.77
HDLBP-223	ENST00000449864		F8W036	122 aa		10.22	□□□□□ -0.77
HDLBP-223	ENST00000449864	CKS2	P33552	79 aa		10.22	□□□□□ -0.77
HDLBP-223	ENST00000449864	CFAP161	Q6P656	301 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms