RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
CHD3-205ENST00000449744 SCXQ7RTU7 201 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 HERC1Q15751 4861 aa9.96□□□□□ -0.82
CHD3-205ENST00000449744 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
CHD3-205ENST00000449744 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
CHD3-205ENST00000449744 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
CHD3-205ENST00000449744 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 ZNF727A8MUV8 499 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 CT83Q5H943 113 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 FAM210AQ96ND0 272 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 CHAC1Q9BUX1 264 aa9.94□□□□□ -0.82
CHD3-205ENST00000449744 NDUFS6O75380 124 aaKnown RBP9.93□□□□□ -0.82
CHD3-205ENST00000449744 PRSS1P07477 247 aa9.93□□□□□ -0.82
CHD3-205ENST00000449744 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
CHD3-205ENST00000449744 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
CHD3-205ENST00000449744 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
CHD3-205ENST00000449744 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
CHD3-205ENST00000449744 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
CHD3-205ENST00000449744 NCR2O95944 276 aa9.92□□□□□ -0.82
CHD3-205ENST00000449744 LINC01551Q86U37 167 aa9.92□□□□□ -0.82
CHD3-205ENST00000449744 CLRN3Q8NCR9 226 aa9.92□□□□□ -0.82
CHD3-205ENST00000449744 SRP19P09132 144 aaKnown RBP9.91□□□□□ -0.82
CHD3-205ENST00000449744 AMMECR1LQ6DCA0 310 aa9.91□□□□□ -0.82
CHD3-205ENST00000449744 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
CHD3-205ENST00000449744 TSKUQ8WUA8 353 aa9.91□□□□□ -0.82
CHD3-205ENST00000449744 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
CHD3-205ENST00000449744 A0A1B0GUT8 65 aa9.9□□□□□ -0.82
CHD3-205ENST00000449744 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
CHD3-205ENST00000449744 APCSP02743 223 aa9.9□□□□□ -0.82
CHD3-205ENST00000449744 OSTCQ9NRP0 149 aa9.9□□□□□ -0.82
CHD3-205ENST00000449744 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 HIGD1CA8MV81 97 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 PMCHP20382 165 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 RNASEKQ6P5S7 137 aaKnown RBP9.89□□□□□ -0.83
CHD3-205ENST00000449744 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
CHD3-205ENST00000449744 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
CHD3-205ENST00000449744 H7C423 109 aa9.88□□□□□ -0.83
CHD3-205ENST00000449744 I3L3M4 83 aa9.88□□□□□ -0.83
CHD3-205ENST00000449744 TMEM191AQ9H0A3 160 aa9.88□□□□□ -0.83
CHD3-205ENST00000449744 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
CHD3-205ENST00000449744 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
CHD3-205ENST00000449744 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
CHD3-205ENST00000449744 TMEM241Q24JQ0 296 aa9.87□□□□□ -0.83
CHD3-205ENST00000449744 FAM74A3Q4VXF1 159 aa9.87□□□□□ -0.83
CHD3-205ENST00000449744 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
CHD3-205ENST00000449744 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
CHD3-205ENST00000449744 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
CHD3-205ENST00000449744 FGF6P10767 208 aa9.86□□□□□ -0.83
CHD3-205ENST00000449744 RIGQ13278 110 aa9.86□□□□□ -0.83
CHD3-205ENST00000449744 BTF3L4Q96K17 158 aa9.86□□□□□ -0.83
CHD3-205ENST00000449744 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 J3QL48 77 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 RAB14P61106 215 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
CHD3-205ENST00000449744 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 ISOC2Q96AB3 205 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 MRAP2Q96G30 205 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 V9GYV3 84 aa9.85□□□□□ -0.83
CHD3-205ENST00000449744 ZNF25P17030 456 aaPredicted RBP9.84□□□□□ -0.83
CHD3-205ENST00000449744 RAB4AP20338 218 aa9.84□□□□□ -0.83
CHD3-205ENST00000449744 RPL23P62829 140 aaKnown RBP9.84□□□□□ -0.83
CHD3-205ENST00000449744 PEA15Q15121 130 aa9.84□□□□□ -0.83
CHD3-205ENST00000449744 ADIRFQ15847 76 aa9.84□□□□□ -0.83
CHD3-205ENST00000449744 AMN1Q8IY45 258 aa9.84□□□□□ -0.83
CHD3-205ENST00000449744 RNF185Q96GF1 192 aa9.84□□□□□ -0.83
CHD3-205ENST00000449744 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
CHD3-205ENST00000449744 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 NUP35Q8NFH5 326 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 CHCHD10Q8WYQ3 142 aaPredicted RBP9.83□□□□□ -0.84
CHD3-205ENST00000449744 TMEM242Q9NWH2 141 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 NAT8Q9UHE5 227 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
CHD3-205ENST00000449744 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
CHD3-205ENST00000449744 TSHBP01222 138 aa9.82□□□□□ -0.84
CHD3-205ENST00000449744 IFITM2Q01629 132 aa9.82□□□□□ -0.84
CHD3-205ENST00000449744 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
CHD3-205ENST00000449744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
CHD3-205ENST00000449744 PPP1R17O96001 155 aa9.81□□□□□ -0.84
CHD3-205ENST00000449744 ESDP10768 282 aa9.81□□□□□ -0.84
CHD3-205ENST00000449744 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
CHD3-205ENST00000449744 POLR2KP53803 58 aaKnown RBP9.81□□□□□ -0.84
CHD3-205ENST00000449744 NDUFA5Q16718 116 aa9.81□□□□□ -0.84
CHD3-205ENST00000449744 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
CHD3-205ENST00000449744 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
CHD3-205ENST00000449744 C9JQL5 133 aa9.8□□□□□ -0.84
CHD3-205ENST00000449744 SMKR1H3BMG3 65 aa9.8□□□□□ -0.84
CHD3-205ENST00000449744 VCYO14598 125 aa9.8□□□□□ -0.84
CHD3-205ENST00000449744 FCER1GP30273 86 aa9.8□□□□□ -0.84
CHD3-205ENST00000449744 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
CHD3-205ENST00000449744 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms