RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 CITED1Q99966 193 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 FAM110AQ9BQ89 295 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 TNFRSF18Q9Y5U5 241 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
AP000253.1-201ENST00000449339 MAPKAPK5-AS1Q8N8E1 139 aa11.62□□□□□ -0.55
AP000253.1-201ENST00000449339 Q9UF83 564 aa11.62□□□□□ -0.55
AP000253.1-201ENST00000449339 OR11H2Q8NH07 326 aa11.62□□□□□ -0.55
AP000253.1-201ENST00000449339 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
AP000253.1-201ENST00000449339 EMP1P54849 157 aa11.61□□□□□ -0.55
AP000253.1-201ENST00000449339 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 RS1O15537 224 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 IL17DQ8TAD2 202 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 E9PLD3 99 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
AP000253.1-201ENST00000449339 A6NDN8 102 aa11.59□□□□□ -0.55
AP000253.1-201ENST00000449339 TMEM263Q8WUH6 116 aaKnown RBP11.59□□□□□ -0.55
AP000253.1-201ENST00000449339 TRRAPQ9Y4A5 3859 aa11.59□□□□□ -0.55
AP000253.1-201ENST00000449339 TRGV1A0A0A0MS02 117 aa11.59□□□□□ -0.55
AP000253.1-201ENST00000449339 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
AP000253.1-201ENST00000449339 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
AP000253.1-201ENST00000449339 GCSHP23434 173 aa11.57□□□□□ -0.56
AP000253.1-201ENST00000449339 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
AP000253.1-201ENST00000449339 ZNRF2Q8NHG8 242 aa11.57□□□□□ -0.56
AP000253.1-201ENST00000449339 C9orf66Q5T8R8 295 aa11.56□□□□□ -0.56
AP000253.1-201ENST00000449339 DNAJC30Q96LL9 226 aa11.56□□□□□ -0.56
AP000253.1-201ENST00000449339 VAMP3Q15836 100 aa11.56□□□□□ -0.56
AP000253.1-201ENST00000449339 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 Q6ZTI0 123 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 C1QTNF4Q9BXJ3 329 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 CIDEAO60543 219 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 FXYD2P54710 66 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 HERVK_113P61574 105 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 OCIAD2Q56VL3 154 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 ZNF479Q96JC4 524 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 VCX2Q9H322 139 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 PYGO1Q9Y3Y4 419 aa11.55□□□□□ -0.56
AP000253.1-201ENST00000449339 H3BRM9 83 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 VPS25Q9BRG1 176 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 INSL3P51460 131 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 CEND1Q8N111 149 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 NOP10Q9NPE3 64 aaKnown RBP11.54□□□□□ -0.56
AP000253.1-201ENST00000449339 IGHV3-38A0A0C4DH36 116 aa11.53□□□□□ -0.56
AP000253.1-201ENST00000449339 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
AP000253.1-201ENST00000449339 KRTAP24-1Q3LI83 254 aa11.53□□□□□ -0.56
AP000253.1-201ENST00000449339 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
AP000253.1-201ENST00000449339 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
AP000253.1-201ENST00000449339 ZNF815PA8K554 130 aa11.52□□□□□ -0.56
AP000253.1-201ENST00000449339 C16orf74Q96GX8 76 aa11.52□□□□□ -0.56
AP000253.1-201ENST00000449339 TAL2Q16559 108 aa11.52□□□□□ -0.57
AP000253.1-201ENST00000449339 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.57
AP000253.1-201ENST00000449339 FAM104AQ969W3 186 aa11.52□□□□□ -0.57
AP000253.1-201ENST00000449339 HIST1H4GQ99525 98 aa11.52□□□□□ -0.57
AP000253.1-201ENST00000449339 FBN1P35555 2871 aaKnown RBP11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 PLAC8L1A1L4L8 177 aa11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 AMMECR1LQ6DCA0 310 aa11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 TMEM238C9JI98 176 aa11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
AP000253.1-201ENST00000449339 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 RRN3P1Q2M238 152 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 AMELXQ99217 191 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 UBE2D4Q9Y2X8 147 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 A0A0J9YXV3 536 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 SMIM13P0DJ93 91 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 CRYBA4P53673 196 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
AP000253.1-201ENST00000449339 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
AP000253.1-201ENST00000449339 K7EQD1 137 aa11.49□□□□□ -0.57
AP000253.1-201ENST00000449339 K7ERU9 68 aa11.49□□□□□ -0.57
AP000253.1-201ENST00000449339 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
AP000253.1-201ENST00000449339 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 H3BUT2 72 aa11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 ZNF22P17026 224 aaPredicted RBP11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
AP000253.1-201ENST00000449339 TRGV2A0A075B6R0 118 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 GAGE7O76087 117 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms