RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 TRGC1P0CF51 173 aa13.1□□□□□ -0.31
UBE2F-217ENST00000448502 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
UBE2F-217ENST00000448502 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
UBE2F-217ENST00000448502 TRAV26-2A0A0B4J265 109 aa13.09□□□□□ -0.31
UBE2F-217ENST00000448502 FAM231DQ6ZW35 169 aa13.09□□□□□ -0.31
UBE2F-217ENST00000448502 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
UBE2F-217ENST00000448502 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.32
UBE2F-217ENST00000448502 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.32
UBE2F-217ENST00000448502 MIAQ16674 131 aa13.08□□□□□ -0.32
UBE2F-217ENST00000448502 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.32
UBE2F-217ENST00000448502 WDR73Q6P4I2 378 aa13.07□□□□□ -0.32
UBE2F-217ENST00000448502 CNFNQ9BYD5 112 aa13.07□□□□□ -0.32
UBE2F-217ENST00000448502 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
UBE2F-217ENST00000448502 PKIAP61925 76 aa13.06□□□□□ -0.32
UBE2F-217ENST00000448502 GAGE6Q13070 117 aa13.06□□□□□ -0.32
UBE2F-217ENST00000448502 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
UBE2F-217ENST00000448502 CLPSL2Q6UWE3 100 aa13.06□□□□□ -0.32
UBE2F-217ENST00000448502 C9orf163Q8N9P6 203 aa13.06□□□□□ -0.32
UBE2F-217ENST00000448502 H7C1H1 209 aa13.05□□□□□ -0.32
UBE2F-217ENST00000448502 RBX1P62877 108 aa13.05□□□□□ -0.32
UBE2F-217ENST00000448502 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
UBE2F-217ENST00000448502 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.05□□□□□ -0.32
UBE2F-217ENST00000448502 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
UBE2F-217ENST00000448502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.05□□□□□ -0.32
UBE2F-217ENST00000448502 A8MWL6 223 aa13.04□□□□□ -0.32
UBE2F-217ENST00000448502 PANO1I0J062 215 aa13.04□□□□□ -0.32
UBE2F-217ENST00000448502 TMEM97Q5BJF2 176 aa13.04□□□□□ -0.32
UBE2F-217ENST00000448502 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
UBE2F-217ENST00000448502 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
UBE2F-217ENST00000448502 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
UBE2F-217ENST00000448502 RPL39LQ96EH5 51 aaKnown RBP13.03□□□□□ -0.32
UBE2F-217ENST00000448502 ADIRFQ15847 76 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 TMEM241Q24JQ0 296 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 ISOC2Q96AB3 205 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 NIT2Q9NQR4 276 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 PLA2G2DQ9UNK4 145 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 V9GYV3 84 aa13.02□□□□□ -0.33
UBE2F-217ENST00000448502 TRBV25-1A0A075B6N4 114 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 PEA15Q15121 130 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 CT83Q5H943 113 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 SDIM1Q6ZPB5 146 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 TSKUQ8WUA8 353 aa13.01□□□□□ -0.33
UBE2F-217ENST00000448502 IQCJQ1A5X6 159 aa13□□□□□ -0.33
UBE2F-217ENST00000448502 IGHV1-24A0A0C4DH33 117 aa12.99□□□□□ -0.33
UBE2F-217ENST00000448502 IGLV10-54A0A075B6I4 117 aa12.98□□□□□ -0.33
UBE2F-217ENST00000448502 SMIM15Q7Z3B0 74 aa12.98□□□□□ -0.33
UBE2F-217ENST00000448502 NAT8Q9UHE5 227 aa12.98□□□□□ -0.33
UBE2F-217ENST00000448502 REG3AQ06141 175 aa12.97□□□□□ -0.33
UBE2F-217ENST00000448502 FAM74A3Q4VXF1 159 aa12.97□□□□□ -0.33
UBE2F-217ENST00000448502 C20orf203Q8NBC4 194 aa12.97□□□□□ -0.33
UBE2F-217ENST00000448502 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
UBE2F-217ENST00000448502 A0A1B0GUT8 65 aa12.96□□□□□ -0.33
UBE2F-217ENST00000448502 CNBPP62633 177 aaKnown RBP12.96□□□□□ -0.33
UBE2F-217ENST00000448502 CLRN3Q8NCR9 226 aa12.96□□□□□ -0.33
UBE2F-217ENST00000448502 NUP35Q8NFH5 326 aa12.96□□□□□ -0.33
UBE2F-217ENST00000448502 TMEM243Q9BU79 118 aa12.96□□□□□ -0.33
UBE2F-217ENST00000448502 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
UBE2F-217ENST00000448502 IGLV4-60A0A075B6I1 120 aa12.95□□□□□ -0.34
UBE2F-217ENST00000448502 MT1HL1P0DM35 61 aa12.95□□□□□ -0.34
UBE2F-217ENST00000448502 AMTP48728 403 aa12.95□□□□□ -0.34
UBE2F-217ENST00000448502 CIRBPQ14011 172 aaKnown RBP12.95□□□□□ -0.34
UBE2F-217ENST00000448502 RNF185Q96GF1 192 aa12.95□□□□□ -0.34
UBE2F-217ENST00000448502 COTL1Q14019 142 aa12.94□□□□□ -0.34
UBE2F-217ENST00000448502 AMN1Q8IY45 258 aa12.94□□□□□ -0.34
UBE2F-217ENST00000448502 hDV102S1A0JD36 115 aa12.93□□□□□ -0.34
UBE2F-217ENST00000448502 SMKR1H3BMG3 65 aa12.93□□□□□ -0.34
UBE2F-217ENST00000448502 SLPIP03973 132 aa12.93□□□□□ -0.34
UBE2F-217ENST00000448502 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
UBE2F-217ENST00000448502 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
UBE2F-217ENST00000448502 NCR2O95944 276 aa12.92□□□□□ -0.34
UBE2F-217ENST00000448502 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
UBE2F-217ENST00000448502 FAM231BA6NCW3 169 aa12.91□□□□□ -0.34
UBE2F-217ENST00000448502 SDHAF1A6NFY7 115 aa12.91□□□□□ -0.34
UBE2F-217ENST00000448502 RAB4AP20338 218 aa12.91□□□□□ -0.34
UBE2F-217ENST00000448502 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
UBE2F-217ENST00000448502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-217ENST00000448502 IGKV2-29A2NJV5 120 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-217ENST00000448502 CHTF8P0CG12 524 aa12.9□□□□□ -0.34
UBE2F-217ENST00000448502 RIGQ13278 110 aa12.9□□□□□ -0.34
UBE2F-217ENST00000448502 SMDT1Q9H4I9 107 aa12.9□□□□□ -0.34
UBE2F-217ENST00000448502 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
UBE2F-217ENST00000448502 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
UBE2F-217ENST00000448502 UBE2L6O14933 153 aa12.89□□□□□ -0.35
UBE2F-217ENST00000448502 Q6ZRU5 148 aa12.89□□□□□ -0.35
UBE2F-217ENST00000448502 A0A087WYN8 130 aa12.88□□□□□ -0.35
UBE2F-217ENST00000448502 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
UBE2F-217ENST00000448502 AP5S1Q9NUS5 200 aa12.88□□□□□ -0.35
UBE2F-217ENST00000448502 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
UBE2F-217ENST00000448502 IGKV3OR2-268A0A0C4DH90 116 aa12.87□□□□□ -0.35
UBE2F-217ENST00000448502 PMCHP20382 165 aa12.87□□□□□ -0.35
UBE2F-217ENST00000448502 CAMPP49913 170 aa12.87□□□□□ -0.35
UBE2F-217ENST00000448502 RAB14P61106 215 aa12.87□□□□□ -0.35
UBE2F-217ENST00000448502 SPACA4Q8TDM5 124 aa12.87□□□□□ -0.35
UBE2F-217ENST00000448502 TNXBP22105 4242 aa12.86□□□□□ -0.35
UBE2F-217ENST00000448502 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-217ENST00000448502 TRBV6-5A0A0K0K1A5 114 aa12.86□□□□□ -0.35
UBE2F-217ENST00000448502 APCSP02743 223 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms