RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
DDX56-207ENST00000448192 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
DDX56-207ENST00000448192 A8MWL6 223 aa11.52□□□□□ -0.57
DDX56-207ENST00000448192 UBE2L6O14933 153 aa11.52□□□□□ -0.57
DDX56-207ENST00000448192 AMTP48728 403 aa11.52□□□□□ -0.57
DDX56-207ENST00000448192 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.57
DDX56-207ENST00000448192 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
DDX56-207ENST00000448192 IGLV4-60A0A075B6I1 120 aa11.51□□□□□ -0.57
DDX56-207ENST00000448192 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
DDX56-207ENST00000448192 PRSS1P07477 247 aa11.51□□□□□ -0.57
DDX56-207ENST00000448192 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
DDX56-207ENST00000448192 KRTAP26-1Q6PEX3 210 aa11.51□□□□□ -0.57
DDX56-207ENST00000448192 SMIM7Q9BQ49 75 aa11.51□□□□□ -0.57
DDX56-207ENST00000448192 CHAC1Q9BUX1 264 aa11.51□□□□□ -0.57
DDX56-207ENST00000448192 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
DDX56-207ENST00000448192 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
DDX56-207ENST00000448192 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
DDX56-207ENST00000448192 FAM210AQ96ND0 272 aa11.49□□□□□ -0.57
DDX56-207ENST00000448192 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
DDX56-207ENST00000448192 FLG2Q5D862 2391 aaPredicted RBP11.49□□□□□ -0.57
DDX56-207ENST00000448192 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
DDX56-207ENST00000448192 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
DDX56-207ENST00000448192 TEX261Q6UWH6 196 aa11.48□□□□□ -0.57
DDX56-207ENST00000448192 CIRBP-AS1Q8TBR5 109 aa11.48□□□□□ -0.57
DDX56-207ENST00000448192 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
DDX56-207ENST00000448192 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
DDX56-207ENST00000448192 CT83Q5H943 113 aa11.47□□□□□ -0.57
DDX56-207ENST00000448192 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
DDX56-207ENST00000448192 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
DDX56-207ENST00000448192 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.57
DDX56-207ENST00000448192 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
DDX56-207ENST00000448192 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
DDX56-207ENST00000448192 AMMECR1LQ6DCA0 310 aa11.45□□□□□ -0.58
DDX56-207ENST00000448192 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
DDX56-207ENST00000448192 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
DDX56-207ENST00000448192 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 hDV102S1A0JD36 115 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 NCR2O95944 276 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 APCSP02743 223 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 OSTCQ9NRP0 149 aa11.44□□□□□ -0.58
DDX56-207ENST00000448192 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
DDX56-207ENST00000448192 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
DDX56-207ENST00000448192 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
DDX56-207ENST00000448192 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
DDX56-207ENST00000448192 PMCHP20382 165 aa11.42□□□□□ -0.58
DDX56-207ENST00000448192 I3L3M4 83 aa11.41□□□□□ -0.58
DDX56-207ENST00000448192 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
DDX56-207ENST00000448192 TMEM191AQ9H0A3 160 aa11.41□□□□□ -0.58
DDX56-207ENST00000448192 ST20Q9HBF5 79 aa11.41□□□□□ -0.58
DDX56-207ENST00000448192 AP5S1Q9NUS5 200 aa11.41□□□□□ -0.58
DDX56-207ENST00000448192 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 H7C423 109 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 FGF6P10767 208 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
DDX56-207ENST00000448192 J3QL48 77 aa11.39□□□□□ -0.59
DDX56-207ENST00000448192 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
DDX56-207ENST00000448192 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.39□□□□□ -0.59
DDX56-207ENST00000448192 V9GYV3 84 aa11.39□□□□□ -0.59
DDX56-207ENST00000448192 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
DDX56-207ENST00000448192 RAB4AP20338 218 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 ADIRFQ15847 76 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 FAM74A3Q4VXF1 159 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 SDIM1Q6ZPB5 146 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 AMN1Q8IY45 258 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 NUP35Q8NFH5 326 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 ISOC2Q96AB3 205 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 TMEM242Q9NWH2 141 aa11.38□□□□□ -0.59
DDX56-207ENST00000448192 TSHBP01222 138 aa11.37□□□□□ -0.59
DDX56-207ENST00000448192 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
DDX56-207ENST00000448192 RPL23P62829 140 aaKnown RBP11.37□□□□□ -0.59
DDX56-207ENST00000448192 RIGQ13278 110 aa11.37□□□□□ -0.59
DDX56-207ENST00000448192 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
DDX56-207ENST00000448192 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
DDX56-207ENST00000448192 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
DDX56-207ENST00000448192 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
DDX56-207ENST00000448192 C9JQL5 133 aa11.36□□□□□ -0.59
DDX56-207ENST00000448192 PANO1I0J062 215 aa11.36□□□□□ -0.59
DDX56-207ENST00000448192 SLPIP03973 132 aa11.36□□□□□ -0.59
DDX56-207ENST00000448192 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
DDX56-207ENST00000448192 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
DDX56-207ENST00000448192 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
DDX56-207ENST00000448192 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
DDX56-207ENST00000448192 SMKR1H3BMG3 65 aa11.35□□□□□ -0.59
DDX56-207ENST00000448192 ESDP10768 282 aa11.35□□□□□ -0.59
DDX56-207ENST00000448192 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
DDX56-207ENST00000448192 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
DDX56-207ENST00000448192 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
DDX56-207ENST00000448192 POLR2KP53803 58 aaKnown RBP11.34□□□□□ -0.59
DDX56-207ENST00000448192 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
DDX56-207ENST00000448192 SRSF3P84103 164 aaKnown RBP11.34□□□□□ -0.59
DDX56-207ENST00000448192 PEA15Q15121 130 aa11.34□□□□□ -0.59
DDX56-207ENST00000448192 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
DDX56-207ENST00000448192 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
DDX56-207ENST00000448192 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
DDX56-207ENST00000448192 PKHD1L1Q86WI1 4243 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms