RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 ZNF493Q6ZR52 646 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 PRO1854Q9UHT4 67 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 Q8N8P6 123 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 MDFIQ99750 246 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 H3BMM0 161 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 LGALS3P17931 250 aaKnown RBP4.45□□□□□ -1.7
PROM1-201ENST00000447510 ASIPP42127 132 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 RNF152Q8N8N0 203 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 UBE2WQ96B02 151 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
PROM1-201ENST00000447510 ZNF80P51504 273 aaPredicted RBP4.45□□□□□ -1.7
PROM1-201ENST00000447510 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 SORL1Q92673 2214 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 K7EMT4 169 aa4.45□□□□□ -1.7
PROM1-201ENST00000447510 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 IGKV3-20P01619 116 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 KRTAP10-3P60369 221 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 DEFB121Q5J5C9 76 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 PRR25Q96S07 402 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 A4D1N5 150 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 LGALS9O00182 355 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 MRPS12O15235 138 aaKnown RBP4.44□□□□□ -1.7
PROM1-201ENST00000447510 RNF185Q96GF1 192 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 U3KQK5 164 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 F5H697 171 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 H3BRN7 92 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 CFC1P0CG37 223 aa4.44□□□□□ -1.7
PROM1-201ENST00000447510 TRAV8-3A0A0A6YYJ7 113 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 ADARB2-AS1A8MUL3 147 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
PROM1-201ENST00000447510 ATXN8Q156A1 80 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 C2orf66Q6UXQ4 117 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 SMIM9A6NGZ8 99 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 BUB3O43684 328 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 DEFB131AP59861 70 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 HERVK_113P63121 156 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 OXLD1Q5BKU9 147 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 TMEM61Q8N0U2 210 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 SLC50A1Q9BRV3 221 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 TMEM126AQ9H061 195 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 ZFAND3Q9H8U3 227 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 CMC4P56277 68 aaPredicted RBP4.43□□□□□ -1.7
PROM1-201ENST00000447510 UBE2D3P61077 147 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 UBE2D2P62837 147 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
PROM1-201ENST00000447510 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 LINC00482Q8N8I6 264 aa4.43□□□□□ -1.7
PROM1-201ENST00000447510 STHQ8IWL8 128 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 GATD1Q8NB37 220 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 OR13C6PQ8NH95 151 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 DEFB114Q30KQ6 69 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 GAGE2AQ6NT46 116 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 C14orf178Q8N769 122 aaPredicted RBP4.42□□□□□ -1.7
PROM1-201ENST00000447510 RPL39LQ96EH5 51 aaKnown RBP4.42□□□□□ -1.7
PROM1-201ENST00000447510 COX6CP09669 75 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 EDN2P20800 178 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 UBE2D1P51668 147 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 RASL10AQ92737 203 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 ODF3Q96PU9 254 aa4.42□□□□□ -1.7
PROM1-201ENST00000447510 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 RPL35AP18077 110 aaKnown RBP4.41□□□□□ -1.7
PROM1-201ENST00000447510 ZFHX3Q15911 3703 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 AKAP9Q99996 3911 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 J3KT08 172 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
PROM1-201ENST00000447510 LINC01559Q495D7 138 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 CEMP1Q6PRD7 247 aaPredicted RBP4.41□□□□□ -1.7
PROM1-201ENST00000447510 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 SPXQ9BT56 116 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 SMIM2Q9BVW6 85 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 MGAM2Q2M2H8 2515 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 IGHV3OR16-12A0A075B7B8 117 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 TRAV25A0A0B4J276 109 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 A0A0J9YY99 117 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 A0A0U1RRA0 63 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 RBAKDNA6NC62 111 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 DUSP14O95147 198 aaKnown RBP4.41□□□□□ -1.7
PROM1-201ENST00000447510 HTN1P15515 57 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 TMEM14CQ9P0S9 112 aa4.41□□□□□ -1.7
PROM1-201ENST00000447510 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.7
PROM1-201ENST00000447510 MUSTN1Q8IVN3 82 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 BAALCQ8WXS3 180 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 PHLDA3Q9Y5J5 127 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 PRAC2D3DTV9 90 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 IGLC6P0CF74 106 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 KLK9Q2XQG4 91 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 KLK9Q9UKQ9 250 aa4.4□□□□□ -1.7
PROM1-201ENST00000447510 FAM74A4Q5TZK3 123 aa4.4□□□□□ -1.71
PROM1-201ENST00000447510 APRG1Q8IVJ8 170 aa4.4□□□□□ -1.71
PROM1-201ENST00000447510 TP53TG1Q9Y2A0 90 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms