RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SMCPP49901 116 aaPredicted RBP6.88□□□□□ -1.31
KLHL3-202ENST00000447439 NPC2P61916 151 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 NDUFA11Q86Y39 141 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 FAM104AQ969W3 186 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 VCX2Q9H322 139 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 SETD2Q9BYW2 2564 aaPredicted RBP6.88□□□□□ -1.31
KLHL3-202ENST00000447439 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 F8W1H4 67 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 J3QLI3 93 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 FSHBP01225 129 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 ZNF843Q8N446 348 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 LINC01587Q99440 93 aa6.88□□□□□ -1.31
KLHL3-202ENST00000447439 RHODO00212 210 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 AZU1P20160 251 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 DYNLRB2Q8TF09 96 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 XCL2Q9UBD3 114 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 CR1P17927 2039 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 A4D1N5 150 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 RHOHQ15669 191 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 SLC25A29Q8N8R3 303 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 MAP6D1Q9H9H5 199 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 CCDC168Q8NDH2 2452 aa6.87□□□□□ -1.31
KLHL3-202ENST00000447439 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 C10orf126Q8N4M7 172 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
KLHL3-202ENST00000447439 TCL1BO95988 128 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 NFE4Q86UQ8 179 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
KLHL3-202ENST00000447439 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 NOTCH3Q9UM47 2321 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 APCP25054 2843 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 DEFB113Q30KQ7 82 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 CFAP126Q5VTH2 177 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 Q6ZSV7 163 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 LINC00467Q9BRT7 94 aa6.85□□□□□ -1.31
KLHL3-202ENST00000447439 M0R2P5 195 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 LEPROTO15243 131 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 SCGB1C2P0DMR2 95 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 IGHV3-30-3P0DP02 117 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 Q6ZUT4 128 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 GAGE12HA6NDE8 117 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 DEFB114Q30KQ6 69 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 WFDC11Q8NEX6 87 aa6.84□□□□□ -1.31
KLHL3-202ENST00000447439 UBE2D3P61077 147 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 UBE2D2P62837 147 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 DAND5Q8N907 189 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 CHCHD7Q9BUK0 85 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 A0A0J9YXY3 114 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 NDUFA7O95182 113 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 PRSS2P07478 247 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 TIMM21Q9BVV7 248 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 ITPR3Q14573 2671 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 WFDC10AQ9H1F0 79 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 PEMTQ9UBM1 199 aa6.83□□□□□ -1.32
KLHL3-202ENST00000447439 J3QR89 54 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 FHL3Q13643 280 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 ODF3L2Q3SX64 289 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 A0A0U1RRA0 63 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 Q1RN00 199 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
KLHL3-202ENST00000447439 JMJD1CQ15652 2540 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 TRGV1A0A0A0MS02 117 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 A8MWV9 139 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 PLA2G2AP14555 144 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
KLHL3-202ENST00000447439 ESM1Q9NQ30 184 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 DNAJC9-AS1A6NH13 148 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 INSP01308 110 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 FOXI1Q12951 378 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 C2CD3Q4AC94 2353 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 TMEM263Q8WUH6 116 aaKnown RBP6.81□□□□□ -1.32
KLHL3-202ENST00000447439 ZNF625Q96I27 306 aaPredicted RBP6.81□□□□□ -1.32
KLHL3-202ENST00000447439 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 C1QTNF4Q9BXJ3 329 aa6.81□□□□□ -1.32
KLHL3-202ENST00000447439 LINC00694P0DN24 101 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 Q8N2B8 174 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 ACANP16112 2415 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 FLNAP21333 2647 aaKnown RBP6.8□□□□□ -1.32
KLHL3-202ENST00000447439 IGHV3-33P01772 117 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 MRPS36P82909 103 aaKnown RBP6.8□□□□□ -1.32
KLHL3-202ENST00000447439 COX6A2Q02221 97 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 Q6ZTI0 123 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 LITAFQ99732 161 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 CDKN2A-AS1Q9UH64 79 aa6.8□□□□□ -1.32
KLHL3-202ENST00000447439 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms