RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 EMP1P54849 157 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 PTH2Q96A98 100 aa6.88□□□□□ -1.31
COL6A4P1-201ENST00000446690 RHODO00212 210 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 RS1O15537 224 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 SCGB1A1P11684 91 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 Q6ZTI0 123 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 RAB37Q96AX2 223 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 RHOHQ15669 191 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 ZNF479Q96JC4 524 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 C1QTNF4Q9BXJ3 329 aa6.87□□□□□ -1.31
COL6A4P1-201ENST00000446690 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 LINC01549A6NIU2 74 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 SIVA1O15304 175 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 PMVKQ15126 192 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 RRN3P1Q2M238 152 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 C20orf203Q8NBC4 194 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 GAGE7O76087 117 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 FABP2P12104 132 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 C16orf74Q96GX8 76 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 EDA2RQ9HAV5 297 aa6.85□□□□□ -1.31
COL6A4P1-201ENST00000446690 TRGV2A0A075B6R0 118 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 CITED1Q99966 193 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 C2CD3Q4AC94 2353 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 INSL3P51460 131 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 CEMP1Q6PRD7 247 aaPredicted RBP6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 ZNRF2Q8NHG8 242 aa6.84□□□□□ -1.31
COL6A4P1-201ENST00000446690 NSD1Q96L73 2696 aaPredicted RBP6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 A0A1B0GV72 72 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 TMEM170BQ5T4T1 132 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 VCX2Q9H322 139 aa6.83□□□□□ -1.32
COL6A4P1-201ENST00000446690 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 JMJD1CQ15652 2540 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 TRBV25-1A0A075B6N4 114 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 GAGE12HA6NDE8 117 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 SMIM13P0DJ93 91 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 RNASE13Q5GAN3 156 aaKnown RBP6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 SLC25A29Q8N8R3 303 aa6.82□□□□□ -1.32
COL6A4P1-201ENST00000446690 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 FXYD2P54710 66 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 GAGE4Q13068 117 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 GAGE5Q13069 117 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 PRADC1Q9BSG0 188 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 CHCHD7Q9BUK0 85 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 K7EQD1 137 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 PAPPA-AS1Q5QFB9 102 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 NOTCH3Q9UM47 2321 aa6.81□□□□□ -1.32
COL6A4P1-201ENST00000446690 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 K7ERJ3 54 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
COL6A4P1-201ENST00000446690 MYMXA0A1B0GTQ4 84 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 E9PLD3 99 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 GCSHP23434 173 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 HERVK_113P61574 105 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 OVOL2Q9BRP0 275 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 NACAE9PAV3 2078 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
COL6A4P1-201ENST00000446690 IGHV3-64A0A075B6Q5 118 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 LOC100131303A0A0U1RQF7 123 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 WFDC2Q14508 124 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 HIGD1BQ9P298 99 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms