RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 VAX2Q9UIW0 290 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 TRGV1A0A0A0MS02 117 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 FABP5P3A8MUU1 101 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 LTAP01374 205 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 AZU1P20160 251 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 ESRGQ1W209 222 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 TTC32Q5I0X7 151 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 PRR9Q5T870 116 aa4.76□□□□□ -1.65
HDAC9-216ENST00000446646 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 PLAC8L1A1L4L8 177 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 B4DEV8 164 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 M0R2P5 195 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 PRYO14603 147 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GAGE7O76087 117 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GAS8-AS1O95177 125 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 IGLV2-11P01706 119 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GAGE12FP0CL80 117 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GAGE12GP0CL81 117 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GAGE12IP0CL82 117 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 GNG4P50150 75 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 HNRNPA3P51991 378 aaKnown RBP4.75□□□□□ -1.65
HDAC9-216ENST00000446646 ERVFC1-1P60608 527 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 OR5I1Q13606 314 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 OCIAD2Q56VL3 154 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 BAGE2Q86Y30 109 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 C11orf52Q96A22 123 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 TMEM70Q9BUB7 260 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 KLF12Q9Y4X4 402 aa4.75□□□□□ -1.65
HDAC9-216ENST00000446646 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 SPINK4O60575 86 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 RAB5BP61020 215 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 TEX261Q6UWH6 196 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 COX8CQ7Z4L0 72 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 LINC00612Q8N6U2 182 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 C11orf72Q8NBR9 251 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 ORAOV1Q8WV07 137 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 PCNPQ8WW12 178 aaKnown RBP4.74□□□□□ -1.65
HDAC9-216ENST00000446646 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 LINC00479Q96M42 142 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 EIF5A2Q9GZV4 153 aaKnown RBP4.74□□□□□ -1.65
HDAC9-216ENST00000446646 TP53TG3Q9ULZ0 132 aa4.74□□□□□ -1.65
HDAC9-216ENST00000446646 TRGV4A0A0C4DH28 118 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 IGHV3-16A0A0C4DH30 117 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 FAM231BA6NCW3 169 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 RBFOX3A6NFN3 312 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 SH2D1AO60880 128 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 SCO1O75880 301 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 MGST1P10620 155 aaKnown RBP4.73□□□□□ -1.65
HDAC9-216ENST00000446646 CCL20P78556 96 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 Q6ZTI0 123 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 RASL10AQ92737 203 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 TVP23CQ96ET8 276 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 ZC2HC1AQ96GY0 325 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 UPK3BQ9BT76 320 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 MRPL16Q9NX20 251 aaKnown RBP4.73□□□□□ -1.65
HDAC9-216ENST00000446646 HSPB8Q9UJY1 196 aa4.73□□□□□ -1.65
HDAC9-216ENST00000446646 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 A0A0J9YY99 117 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 C9JCJ5 164 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 H3BNG1 76 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 P01737 135 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 CRYGDP07320 174 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 CXCL1P09341 107 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 ZNF80P51504 273 aaPredicted RBP4.72□□□□□ -1.65
HDAC9-216ENST00000446646 ZNF506Q5JVG8 444 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 PIK3CD-AS1Q5SR53 167 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 LELP1Q5T871 98 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 FAM19A1Q7Z5A9 133 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 GATD1Q8NB37 220 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 SMDT1Q9H4I9 107 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 IL36BQ9NZH7 164 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 MRPS16Q9Y3D3 137 aaKnown RBP4.72□□□□□ -1.65
HDAC9-216ENST00000446646 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
HDAC9-216ENST00000446646 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 A8MWV9 139 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 H3BVH4 76 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 RHODO00212 210 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 GNRH2O43555 120 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 PEA15Q15121 130 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 ZNF876PQ49A33 203 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 C9orf85Q96MD7 179 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 PRADC1Q9BSG0 188 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 PRO0255Q9UI72 69 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 ICOSQ9Y6W8 199 aa4.71□□□□□ -1.66
HDAC9-216ENST00000446646 IGKV3D-20A0A0C4DH25 116 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 IGHV3-53P01767 116 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 SMIM17P0DL12 118 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-216ENST00000446646 RHOHQ15669 191 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 C4orf26Q17RF5 130 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 SPANXN1Q5VSR9 72 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 Q6ZQT7 251 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 SMIM7Q9BQ49 75 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms